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Top Forums UNIX for Beginners Questions & Answers UNIX command to select the best edge values from a network file Post 303045060 by vgersh99 on Wednesday 11th of March 2020 09:51:06 AM
Old 03-11-2020
how about (a bit verbose):
awk -f san.awk myInputFile, where san.awk is:
Code:
BEGIN {
  FS=OFS="\t"
  i1=1
  i2=2
  v=3
}
function abs(x)    { return x < 0 ? -x : x }

FNR>1 {
   idx=($i1 > $i2)? $i1 OFS $i2 : $i2 OFS $i1
   if (abs(a[idx])<abs($v))
      a[idx]=$v
}
END {
  for (i in a)
    print i,a[i]
}

results in:
Code:
AT1G01070       AT1G01060       1.214972
AT1G01020       AT1G01010       -1.90043
AT1G01073       AT1G01070       0.790549


Last edited by vgersh99; 03-11-2020 at 11:02 AM..
This User Gave Thanks to vgersh99 For This Post:
 

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dispatch_apply(3)					   BSD Library Functions Manual 					 dispatch_apply(3)

NAME
dispatch_apply -- schedule blocks for iterative execution SYNOPSIS
#include <dispatch/dispatch.h> void dispatch_apply(size_t iterations, dispatch_queue_t queue, void (^block)(size_t)); void dispatch_apply_f(size_t iterations, dispatch_queue_t queue, void *context, void (*function)(void *, size_t)); DESCRIPTION
The dispatch_apply() function provides data-level concurrency through a "for (;;)" loop like primitive: dispatch_queue_t the_queue = dispatch_get_concurrent_queue(DISPATCH_QUEUE_PRIORITY_DEFAULT); size_t iterations = 10; // 'idx' is zero indexed, just like: // for (idx = 0; idx < iterations; idx++) dispatch_apply(iterations, the_queue, ^(size_t idx) { printf("%zu ", idx); }); Like a "for (;;)" loop, the dispatch_apply() function is synchronous. If asynchronous behavior is desired, please wrap the call to dispatch_apply() with a call to dispatch_async() against another queue. Sometimes, when the block passed to dispatch_apply() is simple, the use of striding can tune performance. Calculating the optimal stride is best left to experimentation. Start with a stride of one and work upwards until the desired performance is achieved (perhaps using a power of two search): #define STRIDE 3 dispatch_apply(count / STRIDE, queue, ^(size_t idx) { size_t j = idx * STRIDE; size_t j_stop = j + STRIDE; do { printf("%zu ", j++); } while (j < j_stop); }); size_t i; for (i = count - (count % STRIDE); i < count; i++) { printf("%zu ", i); } FUNDAMENTALS
Conceptually, dispatch_apply() is a convenient wrapper around dispatch_async() and a semaphore to wait for completion. In practice, the dis- patch library optimizes this function. The dispatch_apply() function is a wrapper around dispatch_apply_f(). SEE ALSO
dispatch(3), dispatch_async(3), dispatch_queue_create(3), dispatch_semaphore_create(3) Darwin May 1, 2009 Darwin
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