01-21-2020
Thank you Dear Scrutinizer and Dear Rudic,
Your commands work good. Thank you again.
The text file includes all files inside the directory.
I do not understand why we need to specify underscore as limiter in column2. Normally each line is space seperated.
Thank you so much for your return.
Kind regards
Boris
10 More Discussions You Might Find Interesting
1. UNIX for Dummies Questions & Answers
What's the command to sort a file in ascending order and redirect the output to another file?
Thanks!!!!!! (1 Reply)
Discussion started by: gyik
1 Replies
2. Shell Programming and Scripting
I appreciate all the help that I've already received but am running into one problem. I can find how to add something before a file with ascending numbers but not like this. I basically have a file that looks like this:
100
101
102
103
104
I need to add the following before each line with... (5 Replies)
Discussion started by: kerpm
5 Replies
3. Shell Programming and Scripting
Hi ,
I am very new to unix as well as shell scripting. I have to write a script for the following requirement.
In a particular mount, have to list all the directories and sub directories along with size of the directory and sub directory in ascending order.
Please help me in this regard and many... (4 Replies)
Discussion started by: nmakkena
4 Replies
4. Shell Programming and Scripting
How can I check if array is in ascending order?
---------- Post updated at 01:53 PM ---------- Previous update was at 01:25 PM ----------
Done it now (0 Replies)
Discussion started by: kristinu
0 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have this single file with a number of sequence inside it of format
>string1
data
>string100
data
>string10
.....
>string5
...
>string67
......
the dots represent data.
I wanted to get the sequences arranged in ascending order like
>string1
data
>string5 (5 Replies)
Discussion started by: sonia102
5 Replies
6. UNIX for Dummies Questions & Answers
Hi,
I have a sequence which has 30000 strings which looks like this
>string2991 234445
>string224 470561
>string121 675386
>string4098 177229
>string8049 255838
>string8 672382
>string1115 578415
I want it to be arranged in ascending order
>string8 672382
>string121... (5 Replies)
Discussion started by: siya@
5 Replies
7. Shell Programming and Scripting
Hi !
I am just trying to list my files in ascending order so that in some other software, I just want merge with some modification, when I list its coming like this
new-10.txt
new-11.txt
new-12.txt
new-13.txt
new-14.txt
new-15.txt
new-16.txt
new-17.txt
new-18.txt
new-19.txt... (2 Replies)
Discussion started by: nex_asp
2 Replies
8. Shell Programming and Scripting
HI
I have a file
# vi assc
values order fin
100 34 45
200 12 64
120 10 23
Here I need to check whether the values of second column"order"
is arranged ascendingly
Note: Always order column will be arranged either in ascending or descending order
How to make it?... (1 Reply)
Discussion started by: Priya Amaresh
1 Replies
9. Shell Programming and Scripting
Hi,
I need to list files in ascending order. Filenames are in format inpTDT_1, inpTDT_2, inpTDT_3 and so on.
I want to list them in the ascending order based on the digit after underscore and send the output to a file.
Please help (5 Replies)
Discussion started by: Neelkanth
5 Replies
10. UNIX for Dummies Questions & Answers
Hello all,
I have a list of file names in a text document where each file name consists of 4 letters and 3 numbers (for example MACR119). There are 48 file names in the document (they are not in alphabetical or numerical order). I would like to reorder the list of names so that the 48th name is... (3 Replies)
Discussion started by: MDeBiasse
3 Replies
LEARN ABOUT DEBIAN
tfbs::matrix
TFBS::Matrix(3pm) User Contributed Perl Documentation TFBS::Matrix(3pm)
NAME
TFBS::Matrix - base class for matrix patterns, containing methods common to all
DESCRIPTION
TFBS::Matrix is a base class consisting of universal constructor called by its subclasses (TFBS::Matrix::*), and matrix manipulation
methods that are independent of the matrix type. It is not meant to be instantiated itself.
FEEDBACK
Please send bug reports and other comments to the author.
AUTHOR - Boris Lenhard
Boris Lenhard <Boris.Lenhard@cgb.ki.se> Modified by Eivind Valen eivind.valen@gmail.com
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are preceded with an underscore.
matrix
Title : matrix
Usage : my $matrix = $pwm->matrix();
$pwm->matrix( [ [12, 3, 0, 0, 4, 0],
[ 0, 0, 0,11, 7, 0],
[ 0, 9,12, 0, 0, 0],
[ 0, 0, 0, 1, 1,12]
]);
Function: get/set for the matrix data
Returns : a reference to 2D array of integers(PFM) or floats (ICM, PWM)
Args : none for get;
a four line string, reference to 2D array, or a 2D piddle for set
pdl_matrix
Title : pdl_matrix
Usage : my $pdl = $pwm->pdl_matrix();
Function: access the PDL matrix used to store the actual
matrix data directly
Returns : a PDL object, aka a piddle
Args : none
revcom
Title : revcom
Usage : my $revcom_pfm = $pfm->revcom();
Function: create a matrix pattern object which is reverse complement
of the current one
Returns : a TFBS::Matrix::* object of the same type as the one
the method acted upon
Args : none
rawprint
Title : rawprint
Usage : my $rawstring = $pfm->rawprint);
Function: convert matrix data to a simple tab-separated format
Returns : a four-line string of tab-separated integers or floats
Args : none
prettyprint
Title : prettyprint
Usage : my $prettystring = $pfm->prettyprint();
Function: convert matrix data to a human-readable string format
Returns : a four-line string with nucleotides and aligned numbers
Args : none
length
Title : length
Usage : my $pattern_length = $pfm->length;
Function: gets the pattern length in nucleotides
(i.e. number of columns in the matrix)
Returns : an integer
Args : none
randomize_columns
Title : randomize_columns
Usage : $pfm->randomize_columns();
Function: Randomizes the columns of a matrix
Returns : Nothing
Args : none
perl v5.14.2 2008-01-24 TFBS::Matrix(3pm)