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Top Forums Programming How to make use others' C library installed not for the system-wide (Ubuntu/Linux)? Post 303042977 by Neo on Wednesday 15th of January 2020 12:04:38 AM
Old 01-15-2020
First, I suggest when troubleshooting, you should:

Use the full path name to file, not relative path name. This will insure there are no strange, unseen PATH issues. For example:

Code:
gcc -Wall -O3 -I ./htslib-1.10.2/htslib  -o vcf_parser01 vcf.c  vcf_parser01.c

I would change this to:

Code:
gcc -Wall -O3 -I /FULL/PATH/TO/HERE/htslib-1.10.2/htslib  -o vcf_parser01 vcf.c  vcf_parser01.c

Second, you should confirm that these objects are in the PATH, exactly, and that you have read / access permission for them.

Sometimes, even the best sys admins install code under one userid, then they work as another userid, and they do not have permissions to access the file. Happens all the time (at least to me, LOL).

This is generally the first two steps I always take (back to basics, before back to the future).
  • Insure your PATH(s) are correct and objects / symbols are in the PATH(s), correctly.
  • Check file and directly permissions for the userid you are using to build.

UNIX and Linux are funny things, they generally do what they are told to do and report back the "facts" as they find them. In your case, gcc cannot find required symbols and objects. This is generally because they cannot find them, i.e. not in the search PATH or the file/directory permissions are "not as required".

Please post back and let me know if you are certain your PATHs are correct and why, using the FULL PATH names to files and directories in your command line for gcc.

Since we are not "standing behind you, watching you type", we cannot "see" what directory you are in, so to be sure, it is always best to use FULL PATH names when troubleshooting a problem like this.

Thanks.
This User Gave Thanks to Neo For This Post:
 

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DtSearchExit(library call)												DtSearchExit(library call)

NAME
DtSearchExit -- Perform orderly shutdown of search engine SYNOPSIS
#include <Dt/Search.h> void DtSearchExit( int return-code); void DtSearchAddUserExit( void (*user_exit)(int)); void DtSearchRemoveUserExit( ); DESCRIPTION
DtSearchExit is an internal exit call for the online API. It may be called by any API module when a fatal error or aborting signal is detected. It performs an orderly shutdown of the search engine including graceful database closure, communications disconnect, release of system resources, restoration of environment, etc., as necessary. It will call a user exit function if one was installed by DtSearchAd- dUserExit. The final action is a call to the standard system exit function so DtSearchExit never returns. The return_code passed to DtSearchExit will eventually be the value passed to exit. Usage of DtSearchExit is not required to use the DtSearch API. Each API function does its own resource cleanup before returning to the caller so process termination outside of the API need not make further reference to the API. For the convenience of API users, DtSearchAddUserExit may be called to install an optional user_exit function which will be called from within DtSearchExit. The user_exit argument is a pointer to a user written function that takes an integer argument and returns void. If DtSearchExit is called, the value of return_code will be passed as the argument to the user_exit function. Calling DtSearchAddUserExit replaces a user_exit installed by a previous call, if any. User exits are typically installed to ensure that required application cleanup is performed if the API should happen to abort. Since DtSearchExit may be called from within a signal catching function, user_exit should not call functions which would be unsafe for a signal catcher to call, as defined by the POSIX standard. DtSearchRemoveUserExit may be called to remove any user_exit installed by a previous call to DtSearchAddUserExit. RETURN VALUE
DtSearchExit and the user_exit installed by DtSearchAddUserExit do not return. SEE ALSO
DtSrAPI(3), DtSearch(5) DtSearchExit(library call)
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