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Top Forums Shell Programming and Scripting Script to process a list of items and uncomment lines with that item in a second file Post 303042866 by LMHmedchem on Wednesday 8th of January 2020 09:40:59 PM
Old 01-08-2020
Script to process a list of items and uncomment lines with that item in a second file

Hello,

I have a src code file where I need to uncomment many lines.

The lines I need to uncomment look like,

Code:
C      CALL l_r(DESNAME,DESOUT, 'Gmax',     ESH(10),  NO_APP, JJ)

The comment is the "C" in the first column. This needs to be deleted so that there are 6 spaces preceding "CALL". The key on this line is 'Gmax'. This lets me know that the line needs to be uncommented.

I have a list of such keys
Code:
Gmax
Gmin
HS10
HS2
HS9
Hmax

Each key (including the single quotes) will occur only once in the src file being processed. I need to process the list file to look in the src file and uncomment the proper lines. There are about 300 keys in the list file.

This is what I tried,
Code:
#! /bin/bash

# file with list of items to find in modify_file
list_file=$1
# file for which a modified copy will be created
modify_file=$2
# final output file
new_file='new_'$modify_file

# copy the file being modified
cp -f $modify_file  work_on_file.txt

# loop through all the lines in the list_file
while IFS= read -r line
do

   # add single quotes
   look_for=\'$line\'

   echo "looking for line with " $look_for

   # look for the value in the current line
   # if the value is found on a line, print the substring of $0 skipping the first character
   # if the value is not on the line, just print the line
   awk -v find_to_modify=$look_for ' { if ($0 ~ find_to_modify)
                                          { print substr($0,2); }
                                       else
                                          { print $0; }
                                     } ' work_on_file.txt > new_file

   # rename the modified file from this loop for the next loop
   mv new_file  work_on_file.txt

done < "$list_file"

# rename final copy
mv work_on_file.txt  $new_file

This simply reads the list file and one at a time looks for the items in the file to modify. The awk code looks for the presence of the key on each line (including the single quotes) and if found prints the substring skipping the first character. When the key is not found on the line, the line is printed unmodified. After the key is processed, the akw modified file is renamed to be the file awk is working on for the next loop.

This works as far as I can tell. I am writing an entire copy of the modified file for each key in the list file, so this is not very efficient. The file renaming at the end of the loop is a bit kludgy as well. This only takes about 7 seconds to run, so maybe I am being picky and should just let it be but I thought I would ask if there were other suggestions.

LMHmedchem
 

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ROOTTAIL(1)						      General Commands Manual						       ROOTTAIL(1)

NAME
root-tail - print text directly to X11 root window SYNOPSIS
root-tail [-g|--geometry GEOMETRY] [-fn|--font FONTSPEC] [--color color] [--reload SEC COMMAND] [--shade] [--outline] [--minspace] [--noflicker] [-f|--fork] [--reverse] [--whole] [--partial] [--update] [--cont STRING] [--wordwrap] [--justify] [--noinitial] [--frame] [-id ID] [-i|--interval SECONDS] [-V] file1[,color[,desc]] [file2[,color[,desc]]] DESCRIPTION
Displays a given file anywhere on your X11 root window, i.e. it is kind of tail -f for multiple files using your desktop background as out- put window. All non-option arguments on the command line are files to be logged. A null desc (example: "/var/log/messages,red,") will prevent the printing of a description and the []'s. General Options --color COLOR Use COLOR as default. --font | -fn FONTSPEC Use font FONTSPEC. This can be either a fixed width font like -fn fixed or any font using -fn '-*-*-*-*-*-*-*-*-*-*-*-*-*-*' with the appropriate fields filled out (see xfontsel). Specifying a different FONTSPEC before each filename will cause each file to be displayed in a different font. -f | --fork Forks to the background. --reverse Display the files in reverse order, with the newest lines at the top. --whole Only display whole lines. If the last line of a file doesn't yet end with a newline character then wait until it does before dis- playing it. This is the default if more than one file is being displayed. --partial This is the opposite of the --whole option (see above). It displays lines even if they don't yet have a newline at the end. This is the default if only one file is being displayed. --update Update partial lines 'in place' if they are still on the screen when they are updated in their files. Using --update automatically turns on --partial. --cont STRING When partial lines are broken into two lines in the display, prefix the 2nd line with STRING. Defaults to "|| ". Specify the "--whole" argument to ensure partial lines are never displayed, or specify "--update" to attempt to "repair" broken lines in-place. --cont-color COLOR Use COLOR when displaying the continuation string (as optionally specified with the --cont option above). --wordwrap The default behaviour is to fit as much as possible onto each line of output, even if this means splitting a word between one line and the next. The --wordwrap argument splits lines at spaces if possible. --justify After wrapping long lines, attempt to justify the text to produce a smooth right-hand margin. Implies --wordwrap. --reload SEC COMMAND Re-display the file(s) and run COMMAND every SEC seconds. The default is to never re-display the file(s). --shade Add black shading to the font. --outline Add a black outline to the font (making redraws quite a bit slower). --minspace Use minimum linespace even when using shading or outlining. This might result in leftover pixels (dependign on font and logfile con- tent). --noflicker Use slower but flicker-free update. --noinitial Don't display the end of the file(s) initially. -id ID Use the given window ID for output instead of the root window. -i | --interval SECONDS Use the specified sleeping interval between checks instead of the default 2.4 seconds. Fractional values are OK. -V Print version information. --frame Draw a frame around the selected area. This is useful when trying to find the perfect geometry. EXAMPLE
root-tail -g 800x250+100+50 -font 10x20 /var/log/messages,green -font 12x24 /var/log/secure,red,'ALERT' BUGS
Some desktop environments open a virtual root window and make it difficult to share it. If you cannot see anything after starting root- tail, try to find a setting "allow programs on desktop" or similar, or manually specify a window id. Should you happen to find any bugs please fix them and send me a diff. NOTE: This program was modified by Marc Lehmann <pcg@goof.com>, who couldn't reach the original author. Please direct bug-reports etc. to pcg@goof.com. http://root-tail.plan9.de/ 4.2 Berkeley Distribution 2004-03-27 ROOTTAIL(1)
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