Rename file in directory using contents within each file
In the below there are two generic .vcf files (genome.S1.vcf and genome.S2.vcf) in a directory. There wont always be two genaric files but I am trying to use bash to rename each of these generic files with specfic text (unique identifier) within in each .vcf. The text will always be different, but it will always be in the same position (after the word FORMAT) on the same line (that starts with #). Each .vcf is tab-delimited, not sure if my attempt is the best way, but hopefully it helps. Thank you .
genome.S1.vcf
genome.S2.vcf
desired (each vcf in directory renamed with unique identifier)
I am on a HP-UX machine I have a directory called "/u01/blobs" and the files look like this:
ls -1
7398
7399
7400
I need to produce a comma delimited file with the following format:
filename,location/filename
i.e:
7398,/u01/blobs/7398
7399,/u01/blobs/7399
7400,/u01/blobs/7400
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