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Top Forums UNIX for Beginners Questions & Answers Bash selection of files with similar name Post 303041481 by ALou on Monday 25th of November 2019 01:09:22 PM
Old 11-25-2019
Bash selection of files with similar name

Hi all,
This is my first day on Linux shell!!!

So, I am trying to write a script that that will pick up pairs of files with the same name (not the same content) but that are different in one character (one is *R1 the other is *R2)...

Something like: look ate the files, whenever they are the same except in the R1/R2, than run ...

The if that I tried is I think is going into the the file content rather than the name....


Did this make any sense?



Thanks a lot.



This is what I was able to do so far....
Code:
#!/bin/bash

file1_path="~/All_files/"
var1=S*R1.fastq.gz
echo $var1 

file2_path="~/All_files/"
var2=S*R2.fastq.gz  
echo $var2


if ["${VAR1:0:18}" = "${VAR2:0:18}"] ; then


Moderator's Comments:
Mod Comment
Please wrap all code, files, input & output/errors in CODE tags.
It makes it far easier to read and preserves spaces for indenting and/or fixed-width data.

Last edited by rbatte1; 12-02-2019 at 10:53 AM..
 

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VAR_EXPORT(3)								 1							     VAR_EXPORT(3)

var_export - Outputs or returns a parsable string representation of a variable

SYNOPSIS
mixed var_export (mixed $expression, [bool $return = false]) DESCRIPTION
var_export(3) gets structured information about the given variable. It is similar to var_dump(3) with one exception: the returned represen- tation is valid PHP code. PARAMETERS
o $expression - The variable you want to export. o $return - If used and set to TRUE, var_export(3) will return the variable representation instead of outputting it. RETURN VALUES
Returns the variable representation when the $return parameter is used and evaluates to TRUE. Otherwise, this function will return NULL. NOTES
Note When the $return parameter is used, this function uses internal output buffering so it cannot be used inside an ob_start(3) callback function. CHANGELOG
+--------+---------------------------------------------------+ |Version | | | | | | | Description | | | | +--------+---------------------------------------------------+ | 5.1.0 | | | | | | | Possibility to export classes and arrays con- | | | taining classes using the __set_state() magic | | | method. | | | | +--------+---------------------------------------------------+ EXAMPLES
Example #1 var_export(3) Examples <?php $a = array (1, 2, array ("a", "b", "c")); var_export($a); ?> The above example will output: array ( 0 => 1, 1 => 2, 2 => array ( 0 => 'a', 1 => 'b', 2 => 'c', ), ) <?php $b = 3.1; $v = var_export($b, true); echo $v; ?> The above example will output: 3.1 Example #2 Exporting classes since PHP 5.1.0 <?php class A { public $var; } $a = new A; $a->var = 5; var_export($a); ?> The above example will output: A::__set_state(array( 'var' => 5, )) Example #3 Using __set_state() (since PHP 5.1.0) <?php class A { public $var1; public $var2; public static function __set_state($an_array) { $obj = new A; $obj->var1 = $an_array['var1']; $obj->var2 = $an_array['var2']; return $obj; } } $a = new A; $a->var1 = 5; $a->var2 = 'foo'; eval('$b = ' . var_export($a, true) . ';'); // $b = A::__set_state(array( // 'var1' => 5, // 'var2' => 'foo', // )); var_dump($b); ?> The above example will output: object(A)#2 (2) { ["var1"]=> int(5) ["var2"]=> string(3) "foo" } NOTES
Note Variables of type resource couldn't be exported by this function. Note var_export(3) does not handle circular references as it would be close to impossible to generate parsable PHP code for that. If you want to do something with the full representation of an array or object, use serialize(3). Warning When var_export(3) exports objects, the leading backslash is not included in the class name of namespaced classes for maximum com- patibility. SEE ALSO
print_r(3), serialize(3), var_dump(3). PHP Documentation Group VAR_EXPORT(3)
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