Sponsored Content
Top Forums UNIX for Beginners Questions & Answers Bash selection of files with similar name Post 303041481 by ALou on Monday 25th of November 2019 01:09:22 PM
Old 11-25-2019
Bash selection of files with similar name

Hi all,
This is my first day on Linux shell!!!

So, I am trying to write a script that that will pick up pairs of files with the same name (not the same content) but that are different in one character (one is *R1 the other is *R2)...

Something like: look ate the files, whenever they are the same except in the R1/R2, than run ...

The if that I tried is I think is going into the the file content rather than the name....


Did this make any sense?



Thanks a lot.



This is what I was able to do so far....
Code:
#!/bin/bash

file1_path="~/All_files/"
var1=S*R1.fastq.gz
echo $var1 

file2_path="~/All_files/"
var2=S*R2.fastq.gz  
echo $var2


if ["${VAR1:0:18}" = "${VAR2:0:18}"] ; then


Moderator's Comments:
Mod Comment
Please wrap all code, files, input & output/errors in CODE tags.
It makes it far easier to read and preserves spaces for indenting and/or fixed-width data.

Last edited by rbatte1; 12-02-2019 at 10:53 AM..
 

10 More Discussions You Might Find Interesting

1. UNIX for Advanced & Expert Users

selection of files based on its types

Daily we are getting some datafiles to our unix server location FTPIN. Incoming File names will be present in the location "/xyz/test/" as below: "infile_A1_YYYYMMDD", "infile_A2_YYYYMMDD", "infile_B1_YYYYMMDD", "infile_C1_YYYYMMDD" "infile_C2_YYYYMMDD" Where A, B and C are the... (3 Replies)
Discussion started by: ganapati
3 Replies

2. Shell Programming and Scripting

selection of context in files

I have a file like this QUEUE: <ITEM(69)> "/NLA///ACHO_EQU_IDX" Q_KEY: <ITEM(69)> "/NLA///ACHO_EQU_IDX" Q_TYPE: <VSTR(32)> "GEN_VSTR_INDEX" ... (1 Reply)
Discussion started by: manas_ranjan
1 Replies

3. Shell Programming and Scripting

Paging/Scrolling a List of files for selection

Hi All, I have the following script and would like to add page up and down functionality to be able to stroll through the list. Is this possible? If so, Any pointers to examples, info, tips, suggestions would be appreciated. BTW, Any suggestion for better practices on the following code... (5 Replies)
Discussion started by: Festus Hagen
5 Replies

4. Shell Programming and Scripting

compare the similar files

I got many pair files, which only have small difference, such as more space, or more empty line, and some unreadable characters. If list by commend "diff", I can see many many difference. So I'd like to write a script to compare the pair files, if 95% contents are same, I will think they are... (2 Replies)
Discussion started by: rdcwayx
2 Replies

5. UNIX for Dummies Questions & Answers

Merge two files with two columns being similar

Hi everyone. How can I merge two files, where each file has 2 columns and the first columns in both files are similar? I want all in a file of 4 columns; join command removes the duplicate columns. 1 Dave 2 Mark 3 Paul 1 Apple 2 Orange 3 Grapes to get it like this in the 3rd file:... (9 Replies)
Discussion started by: Atrisa
9 Replies

6. Shell Programming and Scripting

Looking to find files that are similar.

Hello all, I have a server that is running AIX, running a tool that converts various printstreams (AFP/Metadata) to PDF. This is done using a rexx script and an off the shelf utility. Each report (there's around 125) uses a certain script file, it's basically a text file. I am trying... (5 Replies)
Discussion started by: jeffs42885
5 Replies

7. UNIX for Dummies Questions & Answers

Finding similar strings between two files

Hi, I have a file1 like this: ABAT ABCA1 ABCC1 ABCC5 ABCC8 ABCE1 ABHD2 ABL1 CAMTA1 ACBD3 ACCN1 And I have a second file like this: chr19 46118590 46119564 MACS_peak_1499 3100.00 chr19 46122009 46148405 CYP2B7P1 -2445 chr1 7430312 7430990... (7 Replies)
Discussion started by: a_bahreini
7 Replies

8. Shell Programming and Scripting

Yes or No selection within bash function

I need to add a selection within the bash function below and am having some trouble doing so. phox2b() { printf "\n\n" printf "What is the id of the patient getting Phox2B analysis : "; read id printf "Is this an intronic variant? Y/N "; read match_choice case... (5 Replies)
Discussion started by: cmccabe
5 Replies

9. Shell Programming and Scripting

Bash/shell merge similar lines

Hello, I've been working on a bash script to parse through firewall logs (cisco). I'm nearing the end and have a dilemma. My data looks as such (actual data is several gigs worth of logs - without the headers): sourceIP destinationIP destinationProtocol destinationPort 1.1.1.1 2.2.2.2 ... (2 Replies)
Discussion started by: umang2382
2 Replies

10. Solaris

Getting similar lines in two files

Hi, I need to compare the /etc/passwd files from 2 servers, and extract the users that are similar in these two files. I sorted the 2 files based on the user IDs (UID) (3rd column). I first sorted the files using the username (1st column), however when I use comm to compare the files there is no... (1 Reply)
Discussion started by: anaigini45
1 Replies
QAxObject(3qt)															    QAxObject(3qt)

NAME
QAxObject - QObject that wraps a COM object SYNOPSIS
This class is part of the Qt ActiveQt Extension. #include <qaxobject.h> Inherits QObject and QAxBase. Inherited by QAxScriptEngine. Public Members QAxObject ( QObject * parent = 0, const char * name = 0 ) QAxObject ( const QString & c, QObject * parent = 0, const char * name = 0 ) QAxObject ( IUnknown * iface, QObject * parent = 0, const char * name = 0 ) ~QAxObject () Important Inherited Members QVariant dynamicCall ( const QCString & function, const QVariant & var1 = QVariant ( ), const QVariant & var2 = QVariant ( ), const QVariant & var3 = QVariant ( ), const QVariant & var4 = QVariant ( ), const QVariant & var5 = QVariant ( ), const QVariant & var6 = QVariant ( ), const QVariant & var7 = QVariant ( ), const QVariant & var8 = QVariant ( ) ) QVariant dynamicCall ( const QCString & function, QValueList<QVariant> & vars ) QAxObject * querySubObject ( const QCString & name, const QVariant & var1 = QVariant ( ), const QVariant & var2 = QVariant ( ), const QVariant & var3 = QVariant ( ), const QVariant & var4 = QVariant ( ), const QVariant & var5 = QVariant ( ), const QVariant & var6 = QVariant ( ), const QVariant & var7 = QVariant ( ), const QVariant & var8 = QVariant ( ) ) DESCRIPTION
This class is defined in the Qt ActiveQt Extension, which can be found in the qt/extensions directory. It is not included in the main Qt API. The QAxObject class provides a QObject that wraps a COM object. A QAxObject can be instantiated as an empty object, with the name of the COM object it should wrap, or with a pointer to the IUnknown that represents an existing COM object. If the COM object implements the IDispatch interface, the properties, methods and events of that object become available as Qt properties, slots and signals. The base class, QAxBase, provides an API to access the COM object directly through the IUnknown pointer. QAxObject is a QObject and can be used as such, e.g. it can be organized in an object hierarchy, receive events and connect to signals and slots. Warning: You can subclass QAxObject, but you cannot use the Q_OBJECT macro in the subclass (the generated moc-file will not compile), so you cannot add further signals, slots or properties. This limitation is due to the metaobject information generated in runtime. To work around this problem, aggregate the QAxObject as a member of the QObject subclass. MEMBER FUNCTION DOCUMENTATION
QAxObject::QAxObject ( QObject * parent = 0, const char * name = 0 ) Creates an empty COM object and propagates parent and name to the QObject constructor. To initialize the object, call setControl. QAxObject::QAxObject ( const QString & c, QObject * parent = 0, const char * name = 0 ) Creates a QAxObject that wraps the COM object c. parent and name are propagated to the QWidget contructor. See also control. QAxObject::QAxObject ( IUnknown * iface, QObject * parent = 0, const char * name = 0 ) Creates a QAxObject that wraps the COM object referenced by iface. parent and name are propagated to the QObject contructor. QAxObject::~QAxObject () Releases the COM object and destroys the QAxObject, cleaning up all allocated resources. QVariant QAxBase::dynamicCall ( const QCString & function, const QVariant & var1 = QVariant ( ), const QVariant & var2 = QVariant ( ), const QVariant & var3 = QVariant ( ), const QVariant & var4 = QVariant ( ), const QVariant & var5 = QVariant ( ), const QVariant & var6 = QVariant ( ), const QVariant & var7 = QVariant ( ), const QVariant & var8 = QVariant ( ) ) Calls the COM object's method function, passing the parameters var1, var1, var2, var3, var4, var5, var6, var7 and var8, and returns the value returned by the method, or an invalid QVariant if the method does not return a value or when the function call failed. If function is a method of the object the string must be provided as the full prototype, for example as it would be written in a QObject::connect() call. activeX->dynamicCall( "Navigate(const QString&)", "www.trolltech.com" ); Alternatively a function can be called passing the parameters embedded in the string, e.g. above function can also be invoked using activeX->dynamicCall("Navigate("www.trolltech.com"); All parameters are passed as strings; it depends on the control whether they are interpreted correctly, and is slower than using the prototype with correctly typed parameters. If function is a property the string has to be the name of the property. The property setter is called when var1 is a valid QVariant, otherwise the getter is called. activeX->dynamicCall( "Value", 5 ); QString text = activeX->dynamicCall( "Text" ).toString(); Note that it is faster to get and set properties using QObject::property() and QObject::setProperty(). It is only possible to call functions through dynamicCall() that have parameters or return values of datatypes supported by QVariant. See the QAxBase class documentation for a list of supported and unsupported datatypes. If you want to call functions that have unsupported datatypes in the parameter list, use queryInterface() to retrieve the appropriate COM interface, and use the function directly. IWebBrowser2 *webBrowser = 0; activeX->queryInterface( IID_IWebBrowser2, (void**)&webBrowser ); if ( webBrowser ) { webBrowser->Navigate2( pvarURL ); webBrowser->Release(); } This is also more efficient. Example: qutlook/centralwidget.cpp. QVariant QAxBase::dynamicCall ( const QCString & function, QValueList<QVariant> & vars ) This is an overloaded member function, provided for convenience. It behaves essentially like the above function. Calls the COM object's method function, passing the parameters in vars, and returns the value returned by the method. If the method does not return a value or when the function call failed this function returns an invalid QVariant object. The QVariant objects in vars are updated when the method has out-parameters. QAxObject * QAxBase::querySubObject ( const QCString & name, const QVariant & var1 = QVariant ( ), const QVariant & var2 = QVariant ( ), const QVariant & var3 = QVariant ( ), const QVariant & var4 = QVariant ( ), const QVariant & var5 = QVariant ( ), const QVariant & var6 = QVariant ( ), const QVariant & var7 = QVariant ( ), const QVariant & var8 = QVariant ( ) ) Returns a pointer to a QAxObject wrapping the COM object provided by the method or property name, passing passing the parameters var1, var1, var2, var3, var4, var5, var6, var7 and var8. If name is provided by a method the string must include the full function prototype. If name is a property the string must be the name of the property, and var1, ... var8 are ignored. The returned QAxObject is a child of this object (which is either of type QAxObject or QAxWidget), and is deleted when this object is deleted. It is however safe to delete the returned object yourself, and you should do so when you iterate over lists of subobjects. COM enabled applications usually have an object model publishing certain elements of the application as dispatch interfaces. Use this method to navigate the hierarchy of the object model, e.g. QAxWidget outlook( "Outlook.Application" ); QAxObject *session = outlook.querySubObject( "Session" ); if ( session ) { QAxObject *defFolder = session->querySubObject( "GetDefaultFolder(OlDefaultFolders)", "olFolderContacts" ); //... } Example: qutlook/centralwidget.cpp. SEE ALSO
http://doc.trolltech.com/qaxobject.html http://www.trolltech.com/faq/tech.html COPYRIGHT
Copyright 1992-2007 Trolltech ASA, http://www.trolltech.com. See the license file included in the distribution for a complete license statement. AUTHOR
Generated automatically from the source code. BUGS
If you find a bug in Qt, please report it as described in http://doc.trolltech.com/bughowto.html. Good bug reports help us to help you. Thank you. The definitive Qt documentation is provided in HTML format; it is located at $QTDIR/doc/html and can be read using Qt Assistant or with a web browser. This man page is provided as a convenience for those users who prefer man pages, although this format is not officially supported by Trolltech. If you find errors in this manual page, please report them to qt-bugs@trolltech.com. Please include the name of the manual page (qaxobject.3qt) and the Qt version (3.3.8). Trolltech AS 2 February 2007 QAxObject(3qt)
All times are GMT -4. The time now is 09:30 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy