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Top Forums UNIX for Beginners Questions & Answers Bash selection of files with similar name Post 303041481 by ALou on Monday 25th of November 2019 01:09:22 PM
Old 11-25-2019
Bash selection of files with similar name

Hi all,
This is my first day on Linux shell!!!

So, I am trying to write a script that that will pick up pairs of files with the same name (not the same content) but that are different in one character (one is *R1 the other is *R2)...

Something like: look ate the files, whenever they are the same except in the R1/R2, than run ...

The if that I tried is I think is going into the the file content rather than the name....


Did this make any sense?



Thanks a lot.



This is what I was able to do so far....
Code:
#!/bin/bash

file1_path="~/All_files/"
var1=S*R1.fastq.gz
echo $var1 

file2_path="~/All_files/"
var2=S*R2.fastq.gz  
echo $var2


if ["${VAR1:0:18}" = "${VAR2:0:18}"] ; then


Moderator's Comments:
Mod Comment
Please wrap all code, files, input & output/errors in CODE tags.
It makes it far easier to read and preserves spaces for indenting and/or fixed-width data.

Last edited by rbatte1; 12-02-2019 at 10:53 AM..
 

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DEBUG_ZVAL_DUMP(3)							 1							DEBUG_ZVAL_DUMP(3)

debug_zval_dump - Dumps a string representation of an internal zend value to output

SYNOPSIS
void debug_zval_dump (mixed $variable, [mixed $...]) DESCRIPTION
Dumps a string representation of an internal zend value to output. PARAMETERS
o $variable - The variable being evaluated. RETURN VALUES
No value is returned. EXAMPLES
Example #1 debug_zval_dump(3) example <?php $var1 = 'Hello World'; $var2 = ''; $var2 =& $var1; debug_zval_dump(&$var1); ?> The above example will output: &string(11) "Hello World" refcount(3) Note Beware the refcount The refcount value returned by this function is non-obvious in certain circumstances. For example, a developer might expect the above example to indicate a refcount of 2. The third reference is created when actually calling debug_zval_dump(3). This behavior is further compounded when a variable is not passed to debug_zval_dump(3) by reference. To illustrate, consider a slightly modified version of the above example: Example #2 <?php $var1 = 'Hello World'; $var2 = ''; $var2 =& $var1; debug_zval_dump($var1); // not passed by reference, this time ?> The above example will output: string(11) "Hello World" refcount(1) Why refcount(1)? Because a copy of $var1 is being made, when the function is called. This function becomes even more confusing when a variable with a refcount of 1 is passed (by copy/value): Example #3 <?php $var1 = 'Hello World'; debug_zval_dump($var1); ?> The above example will output: string(11) "Hello World" refcount(2) A refcount of 2, here, is extremely non-obvious. Especially considering the above examples. So what's happening? When a variable has a single reference (as did $var1 before it was used as an argument to debug_zval_dump(3)), PHP's engine opti- mizes the manner in which it is passed to a function. Internally, PHP treats $var1 like a reference (in that the refcount is increased for the scope of this function), with the caveat that if the passed reference happens to be written to, a copy is made, but only at the moment of writing. This is known as "copy on write." So, if debug_zval_dump(3) happened to write to its sole parameter (and it doesn't), then a copy would be made. Until then, the parameter remains a reference, causing the refcount to be incremented to 2 for the scope of the function call. SEE ALSO
var_dump(3), debug_backtrace(3), References Explained, References Explained (by Derick Rethans). PHP Documentation Group DEBUG_ZVAL_DUMP(3)
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