And post current output...
There are a lot of debugging to do e.g. what do you expect from:`cat $fqdn_hosts`?
Here:
What is the meaning of -eq ? So is it appropriate?etc... what is being compared? what is the second variable? etc...
hi
how can i read a file using the unix script and check for one or more field value for a predefined status/value
for example : the file contains the following text
Name IP Address/Mask Type Connection Status
mgmt-eth0(1) ... (2 Replies)
i want a shell script to read the a list of numbers from a file and compare with a unique number with the list.
FOR EXAMPLE :
abc.lst file contains d following
2343
3214
45654
563456
5436
Unique number is 2342 (6 Replies)
Hi,
I have gps receiver log..its giving readings .like below
Trying 127.0.0.1...
Connected to localhost.
Escape character is '^]'.
GPSD,R=1
$GPGSV,3,1,11,08,16,328,40,11,36,127,00,28,33,283,39,20,11,165,00*71... (3 Replies)
I am using the while-loop to read a file.
The file has lines with null-terminated strings (words, actually.)
What I have by that reading - just a first word up to '\0'!
I need to have whole string up to 'new line' - (LF, 10#10, 16#A)
What I am doing wrong?
#make file 'grb' with... (6 Replies)
Hi ,
I have a CSV file ( file.csv) with some data as
below:
A,1,abc,x,y,z,,xyz,20100101,99991231
A,1,abc,x,y,z,234,xyz,20100101,99991231
I have to delete the duplicate line based on
unique identifiers which are values in the
fields- 2,3,4,8.These coulmns in both the rows
have same... (6 Replies)
Hello,
I have this file that sometime contains 0 lines and sometimes 1 or more.
It's supposed to then put the result (could be 0 or 1 or 2 or more) into a variable.
Then it's supposed to echo using an if else statement depending on the value of the variable.
flagvar='wc -l $tempfile |... (1 Reply)
Hi,
i have file which contains data as below(Only sample shown, it may contain more data similar to the one shown here)
i need to read this file line by line and generate an output file like the one below
i.e based on N value the number of MSISDNs will vary, if N=1 then the following... (14 Replies)
Hi All,
I'm trying to figure out which are the trusted-ips and which are not using a script file.. I have a file named 'ip-list.txt' which contains some ip addresses and another file named 'trusted-ip-list.txt' which also contains some ip addresses. I want to read a line from... (4 Replies)
Hello,
I need a program that read a file line by line and prints out lines 1, 2 & 3 after an empty line... An example of entries in the file would be:
SRVXPAPI001 ERRO JUN24 07:28:34 1775
REASON= 0000, PROCID= #E506 #1065: TPCIPPR, INDEX= 003F
... (8 Replies)
Hi all,
I have a log file say Test.log that gets updated continuously and it has data in pipe separated format. A sample log file would look like:
<date1>|<data1>|<url1>|<result1>
<date2>|<data2>|<url2>|<result2>
<date3>|<data3>|<url3>|<result3>
<date4>|<data4>|<url4>|<result4>
What I... (3 Replies)
Discussion started by: pat_pramod
3 Replies
LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS -c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)