Join, merge, fill NULL the void columns of multiples files like sql "LEFT JOIN" by using awk
Hello,
This post is already here but want to do this with another way
Merge multiples files with multiples duplicates keys by filling "NULL" the void columns for anothers joinning files
file1.csv:
file2.csv:
file3.csv:
My desired output is like this, conserve the duplicate key and fill it with the data of anothers files, and the void columns is filling by NULL:
result.csv
I already found code with JOIN but I want to do this with AWK
This is the "join" command :
example sql:
select a.a1,b.b1,c.c1,d.d1,e.e1
from a
left outer join b on a.x=b.x
left outer join c on b.y=c.y
left outer join d on d.z=a.z
inner join a.t=e.t
I know how single outer or inner join works in sql.
But I don't really understand when there are multiple of them.
can... (0 Replies)
Hello,
My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns:
File A: (tab-delimited)
PDB CHAIN Start End Fragment
1avq A 171 176 awyfan
1avq A 172 177 wyfany
1c7k A 2 7... (3 Replies)
Hi All,
I have working (Perl) code to combine 2 input files into a single output file using the join function that works to a point, but has the following limitations:
1. I am restrained to 2 input files only.
2. Only the "matched" fields are written out to the "matched" output file and... (1 Reply)
I have a vim outliner file like this:
Title
title 2
:Testing now
:testing 2
:testing 3
title 3
:testing
:ttt
:ttg
Is there a way to use a script or command to remove... (7 Replies)
Hello;
I am posting to get any help on my code that I have been struggling for some time. The project is to join two files each with 80k~180k rows. I want to merge them together by the shared common column. The problem of the shared column is partially matching, not exactly the same.
File1:... (5 Replies)
Hi guys,
I need to use awk to join 2 files
file_1
A 001
B 002
C 003
file_2
A XX1
B XX2
output desired
A 001 XX1
B 002 missing
C 003 XX2
thank you! (2 Replies)
Hi guys,
I need AWK to merge the following 2 files:
file1
1 a 1 1
2 b 2 2
3 c 3 3
4 d 4 4
file2
a a/a c/c a/c c/c a/a c/t
c c/t c/c a/t g/g c/c c/t
desired output:
1 a 1 1 a/a c/c a/c c/c a/a c/t
2 b 2 2 x x x x x x
3 c 3 3 c/t c/c a/t g/g c/c c/t
4 d 4 4 x x x x x x (2 Replies)
Join and merge multiple files with duplicate key and fill void columns
Hi guys,
I have many files that I want to merge:
file1.csv:
1|abc
1|def
2|ghi
2|jkl
3|mno
3|pqr
file2.csv: (5 Replies)
Discussion started by: yjacknewton
5 Replies
LEARN ABOUT DEBIAN
flow-merge
flow-merge(1) General Commands Manual flow-merge(1)NAME
flow-merge -- Merge flow files.
SYNOPSIS
flow-merge [-aghm] [-b big|little] [-C comment] [-d debug_level] [-o filename] [-z z_level] [file|directory ...]
DESCRIPTION
The flow-merge utility processes files and/or directories of files in the flow-tools format. The resulting merged data set is written to
the standard output or file specified by -o. If file is a single dash (`-') or absent, flow-merge will read from the standard input.
Unlike flow-cat, flow-merge interleaves flow records preserving the relative chronological order.
OPTIONS -a Do not ignore filenames that begin with tmp.
-b big|little
Byte order of output.
-C Comment
Add a comment.
-d debug_level
Enable debugging.
-g Sort file list by capture start time before processing.
-h Display help.
-m Disable the use of mmap().
-p Preload headers. Use to preserve meta information such as lost flows.
-o file Write to file instead of the standard out.
-z z_level
Configure compression level to z_level. 0 is disabled (no compression), 9 is highest compression.
file|directory...
Process the files and/or directory.
EXAMPLES
Merge all flow files begining with ft-v05.2001-05.01, use flow-print to display the results.
flow-merge ft-v05.2001-05-01.* | flow-print
BUGS
None known.
AUTHOR
Larry Lidz ellidz@eridu.uchicago.edu
SEE ALSO flow-tools(1)flow-merge(1)