Sponsored Content
Top Forums Programming Format specifier for sscanf() in C Post 303040623 by yifangt on Saturday 2nd of November 2019 08:35:57 AM
Old 11-02-2019
Format specifier for sscanf() in C

Hello, I have formatted lines delimited by colon ":", and I need to parse the line into two parts with sscanf() with format specifiers.
infile.txt:
Code:
Sample Name: sample1
SNPs                         : 91
MNPs                         : 1
Insertions                   : 5
Deletions                    : 2
Indels                       : 0
Same as reference            : 1
Missing Genotype             : 44
SNP Transitions/Transversions: 1.74 (73/42)
Total Het/Hom ratio          : 2.96 (74/25)

And here is my code fragment:
Code:
char line[256];     //for row read from file
char name[32];      //1st part (key part) parsed from each line[]
char str1[8];       //2nd part (value part) parsed from each line[]

sscanf(line, "%[^:] : %s", name, str1);      //scan in two halves delimited by ":", in the 2nd half, only take the first part delimited by space/tab
                                             //e.g. line1: Sample Name-> name; sample1 -> str1 
                                             //line10: Total Het/Hom ratio -> name; 2.96-> str1,  discard (74/25)

There may not be space/tab before or after the colon. Ignoring the float/integer data type for numbers at this moment.
For each line I could not get the first half to name, and the first part after ":" into str1. The problem is sscanf() does not stop at the end of each line. Spent some time reading the manpage of sscanf() and my old post, could not figure it out myself.
What is wrong with my sscanf() line? Thanks a lot.

Last edited by yifangt; 11-02-2019 at 01:54 PM.. Reason: typo and add color
 

10 More Discussions You Might Find Interesting

1. Programming

sscanf function is failing

Please delete this thread. (0 Replies)
Discussion started by: jxh461
0 Replies

2. Programming

sscanf !!

I have a string Form this string, I want to extract I am unable to do that with sscanf because of the space between the words. What else can I use? #include <stdio.h> char buf_2; int main() { char *buf_1 = "\\\\?\\whats going on"; sscanf(buf_1,... (4 Replies)
Discussion started by: the_learner
4 Replies

3. Shell Programming and Scripting

awk printf formatting using string format specifier.

Hi all, My simple AWK code does C = A - B If C can be a negative number, how awk printf formating handles it using string format specifier. Thanks in advance Kanu :confused: (9 Replies)
Discussion started by: kanu_pathak
9 Replies

4. Programming

help with sscanf()!

Hi everybody, i need help with this function, i'm programming in CGI with C and i can't make this work. QUERY_STRING is something like: user=MYUSER&pass=MYPASS So, what i want is to store the strings containing the username and the password into str1 and str2 respetively, here's the... (4 Replies)
Discussion started by: Zykl0n-B
4 Replies

5. Programming

help with sscanf

I need to match a float inside a very long string (about 5000 chars) with sscanf. (I trimmed the string in this example.) I can't seem to match all the chars that come before and after the float. int main(void) { char A = ""; strcat(A, " hello world! WORD' name='5.3498' hello world! ... (1 Reply)
Discussion started by: limmer
1 Replies

6. Programming

Help with sscanf

sscanf does not stop at the first "&". How can I extract "doe" ? char A = "name=john&last=doe&job=vacant&"; char B = "last"; char C = ""; char *POINTER = strstr(A, B); sscanf(POINTER + strlen(B), "=%s%*", C); printf("%s\n", C); // doe&job=vacant& (2 Replies)
Discussion started by: limmer
2 Replies

7. Programming

using sscanf

How can I separetely extract the string and int after "dribble" ? (sscanf must limit TEXT to 9 chars to avoid buffer overflows.) How come this code does not work with "dribbletext08" but does with "dribbletext05" ? int main(void) { char TEXT = ""; int NUMBER = 0; ... (2 Replies)
Discussion started by: cyler
2 Replies

8. Shell Programming and Scripting

Retaining the Unix CSV format in Excel format while exporting

Hi All, I have created a Unix Shell script whch creates a *.csv file and export it to Excel. The problem i am facing is that Users wants one of the AMOUNT field in comma separted values. Example : if the Amount has the value as 3000000 User wants to be in 3,000,000 format. This Amount format... (2 Replies)
Discussion started by: rawat_me01
2 Replies

9. Programming

sscanf() weired behaviour

Hi with the following code int a, b; while ((n = readline (connfd, buf, sizeof(buf)-1)) > 0) { buf = '\0'; if (sscanf(buf,"%d %d",&a,&b) != 2) snprintf (buf, sizeof(buf), "data error\r\n"); else { printf("\nRecvd %d and %d",a,b); ... (1 Reply)
Discussion started by: princebadshah
1 Replies

10. Shell Programming and Scripting

Need script for transferring bulk files from one format to text format

"Help Me" Need script for transferring bulk files from one format to text format in a unix server. Please suggest (2 Replies)
Discussion started by: Kranthi Kumar
2 Replies
COLORGCCRC(5)							File Formats Manual						     COLORGCCRC(5)

NAME
colorgccrc - configuration file for colorgcc DESCRIPTION
A colorgccrc configuration file is used to configure the highlighting of the compiler output from colorgcc. SYNTAX
Each line consists of a keyword designating a configuration variable. The keyword is followed by `:' and then one or several values (depending on the keyword). Lines beginning with a hash mark `#' are comments. CONFIGURATION VARIABLES
g++ | gcc | c++ | cc | g77 | gcj | gnat | gpc Specifies the paths to the compilers. Takes one value; a path to the compiler. nocolor Specifies what terminal types colorization should be disabled on. Takes one or several values, separated by whitespace. srcColor Specifies the highlighting attributes source-code should be given. Takes one or several color attributes. See the section COLOR ATTRIBUTES for more information. introColor Specifies the highlighting attributes for normal compiler output. Takes one or several color attributes. See the section COLOR ATTRIBUTES for more information. warningFileNameColor | errorFileNameColor Specifies the highlighting attributes for the filename in a warning or an error, respectively. Takes one or several color attributes. See the section COLOR ATTRIBUTES for more information. warningNumberColor | errorNumberColor Specifies the highlighting attributes for the line-number in a warning or an error, respectively. Takes one or several color attributes. See the section COLOR ATTRIBUTES for more information. warningMessageColor | errorMessageColor Specifies the highlighting attributes for the message-text in a warning or an error, respectively. Takes one or several color attributes. See the section COLOR ATTRIBUTES for more information. COLOR ATTRIBUTES
The following attributes are valid for highlighting. clear, reset bold, underline, underscore, blink, reverse, concealed black, red, green, yellow, blue, magenta, cyan, white on_black, on_red, on_green, on_yellow, on_blue, on_magenta, on_cyan, on_white SEE ALSO
gcc(1), colorgcc(1) HISTORY
Jan 15 2003: Initial version of this manual-page. REPORTING BUGS
Report bugs to <jmoyers@geeks.com> AUTHORS
Jamie Moyers <jmoyers@geeks.com> is the author of colorgcc. This manual page was written by Joe Wreschnig <piman@sacredchao.net>, and modified by David Weinehall <tao@debian.org>, for the Debian GNU/Linux system (but may be used by others). COPYRIGHT
Copyright (C) 2003 Jamie Moyers This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICU- LAR PURPOSE. Jan 15, 2003 COLORGCCRC(5)
All times are GMT -4. The time now is 06:24 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy