Hi,
I am having file which contains around 15 columns, i need to fetch column 3,12,14 based on the condition that column 3 starts with 40464
this is the sample data
how to achieve that (3 Replies)
I’m trying to modify someone perl script to fix a bug. The piece of code checks that the zone name you want to add is unique. However, when the code runs, it finds a partial match using grep, and decides it already exists, so the “create” command exits.
$cstatus = `${ZADM} list -vic | grep... (3 Replies)
Hi, I was trying to figure this out but failed so I hope someone here can help me, thank you in advance.
I have two files.
file1: aa M
bb N
cc O
dd P
ee Q file2: aa A_87_P254063
cc A_87_P016532
bb A_87_P104793
dd A_87_P055331
ee A_87_P059706
aa A_87_P071636
ee A_87_P028302... (2 Replies)
Hi I have a question and hope I can get answer here. Thank you in advance.
I have two files:
file1:
aa X
bb Y
cc Z
file2:
cc A
bb B
dd C
aa D
bb E
If the 1st column match in both file1 and file2, the 2nd column in file2 will be replaced by the 2nd column in file1. If there is no... (2 Replies)
I posted the incorrect files yesterday and apologize. I also modified the awk script but with no luck. There are two text files in the zip (name.txt and output.txt). I am trying to match $2 in name.txt with $1 in output.txt and if they match then $1 of name.txt is copied to $7 of output.txt. ... (7 Replies)
I have a specific set (all ending with .bam) of downloaded files in a directory /home/cmccabe/Desktop/NGS/API/2-15-2016. What I am trying to do is use a match to $2 in name to rename the downloaded files. To make things a more involved the date of the folder is unique and in the header of name... (1 Reply)
Hi All,
I have 100 folders with the first delimiter has a unique name i.e (123_hello and 575_hello) and each folder have atlist 1000 plus files with naming convention i.e (575_hello_1.iso ... 575_hello_1000.iso).
575_hello/575_hello_1.iso
575_hello/575_hello_2.iso
575_hello/575_hello_3.iso... (8 Replies)
Hi, I have a tab delimited text file like this one. I need to do a partial match of a particular cell and then replace matches with an empty cell. So here is a sample:
Smith FordMustang ChevroletCamaro
Miller FordFiesta
Jones KiaSorrento
Davis ChevroletCamaro
Johnson ToyotaHighlander
I... (4 Replies)
I am trying to create a cronjob that will run on startup that will look at a list.txt file to see if there is a later version of a database using database.txt as the source. The matching lines are written to output.
$1 in database.txt will be in list.txt as a partial match. $2 of database.txt... (2 Replies)
In the portion of bash below I am using rename to match the $id variable to $file and when a match (there will alwsys be one) is found then the $id is removed from each bam and bam.bai in $file and _test is added to thee file name before the extension. Each of the variables is set correctly but... (3 Replies)
Discussion started by: cmccabe
3 Replies
LEARN ABOUT FREEBSD
uniq
UNIQ(1) BSD General Commands Manual UNIQ(1)NAME
uniq -- report or filter out repeated lines in a file
SYNOPSIS
uniq [-c | -d | -u] [-i] [-f num] [-s chars] [input_file [output_file]]
DESCRIPTION
The uniq utility reads the specified input_file comparing adjacent lines, and writes a copy of each unique input line to the output_file. If
input_file is a single dash ('-') or absent, the standard input is read. If output_file is absent, standard output is used for output. The
second and succeeding copies of identical adjacent input lines are not written. Repeated lines in the input will not be detected if they are
not adjacent, so it may be necessary to sort the files first.
The following options are available:
-c Precede each output line with the count of the number of times the line occurred in the input, followed by a single space.
-d Only output lines that are repeated in the input.
-f num Ignore the first num fields in each input line when doing comparisons. A field is a string of non-blank characters separated from
adjacent fields by blanks. Field numbers are one based, i.e., the first field is field one.
-s chars
Ignore the first chars characters in each input line when doing comparisons. If specified in conjunction with the -f option, the
first chars characters after the first num fields will be ignored. Character numbers are one based, i.e., the first character is
character one.
-u Only output lines that are not repeated in the input.
-i Case insensitive comparison of lines.
ENVIRONMENT
The LANG, LC_ALL, LC_COLLATE and LC_CTYPE environment variables affect the execution of uniq as described in environ(7).
EXIT STATUS
The uniq utility exits 0 on success, and >0 if an error occurs.
COMPATIBILITY
The historic +number and -number options have been deprecated but are still supported in this implementation.
SEE ALSO sort(1)STANDARDS
The uniq utility conforms to IEEE Std 1003.1-2001 (``POSIX.1'') as amended by Cor. 1-2002.
HISTORY
A uniq command appeared in Version 3 AT&T UNIX.
BSD December 17, 2009 BSD