Sponsored Content
Top Forums UNIX for Beginners Questions & Answers Compare two files and print based on common variable value. Post 303040561 by RudiC on Thursday 31st of October 2019 03:05:38 PM
Old 10-31-2019
What errors do you get? You're applying the logics designed for "FILE" and depending on its structure and wellbehavedness to a totally different data set. That can't fly. Try instead
Code:
awk 'FNR==NR {DF["\"" $1 "\""] = $0; next} $2 in DF {print DF[$2], $0}' file1 FS="[ =]" file2

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Merging 2 files based on a common column

Hi All, I do have 2 files file 1 has 4 tab delimited columns 234 a c dfgyu 294 b g fih 302 c h jzh 328 z c san 597 f g son File 2 has 2 tab delimted columns 234 23 302 24 597 24 I want to merge file 2 with file 1 based on the data common in both files which is the first column so... (6 Replies)
Discussion started by: Lucky Ali
6 Replies

2. Shell Programming and Scripting

join files based on a common field

Hi experts, Would you please help me with this? I have several files and I need to join the forth field of them based on the common first field. here's an example... first file: 280346 39.88 -75.08 547.8 280690 39.23 -74.83 538.7 280729 40.83 -75.08 499.2 280907 40.9 -74.4 507.8... (5 Replies)
Discussion started by: GoldenFire
5 Replies

3. UNIX for Dummies Questions & Answers

compare two files based on common field in unix

I have two files in UNIX. 1st file is Entity and Second File is References. 1st File has only one column named Entity ID and 2nd file has two columns Entity ID | Person ID. I want to produce a output file where entity id's are matching in both the files. Entity File 624197 624252 624264... (4 Replies)
Discussion started by: PRS
4 Replies

4. Shell Programming and Scripting

Compare a common field in two files and append a column from File 1 in File2

Hi Friends, I am new to Shell Scripting and need your help in the below situation. - I have two files (File 1 and File 2) and the contents of the files are mentioned below. - "Application handle" is the common field in both the files. (NOTE :- PLEASE REFER TO THE ATTACHMENT "Compare files... (2 Replies)
Discussion started by: Santoshbn
2 Replies

5. Shell Programming and Scripting

common entries between files based on 1st column

Hi, I am trying to get the common entries from 2 files based on 1st field.. However when I try to do in perl I am getting blank output.. How can I do this in awk? open(BUFF1, "my_genes"); open(BUFF3, "rawcounts"); #open(WRBUFF,">result_rawcounts"); while($line =<BUFF1>) { ... (3 Replies)
Discussion started by: Diya123
3 Replies

6. Shell Programming and Scripting

Compare two sample files and find common

Hi I have two sample files attached here one file contain entries in one column and second file contains entries in many columns I have to match entries of first file with entries in secon d file form secon column onwards and if matches write "match" in front of it. I tried several... (11 Replies)
Discussion started by: manigrover
11 Replies

7. Shell Programming and Scripting

Compare multiple files, and extract items that are common to ALL files only

I have this code awk 'NR==FNR{a=$1;next} a' file1 file2 which does what I need it to do, but for only two files. I want to make it so that I can have multiple files (for example 30) and the code will return only the items that are in every single one of those files and ignore the ones... (7 Replies)
Discussion started by: castrojc
7 Replies

8. Shell Programming and Scripting

Help on writing data from 2 different files to one based on a common factor

Hello all, I have 2 text files. For example: File1.txt contains data A B C D ****NEXT**** X Y Z ****NEXT**** L M N and File2.txt contains data (13 Replies)
Discussion started by: vat1kor
13 Replies

9. UNIX for Dummies Questions & Answers

How to join 2 .txt files based on a common column?

Hi all, I'm trying to join two .txt file tab delimitated based on a common column. File 1 transcript_id gene_id length effective_length expected_count TPM FPKM IsoPct comp1000201_c0_seq1 comp1000201_c0 337 183.51 0.00 0.00 0.00 0.00 comp1000297_c0_seq1 ... (1 Reply)
Discussion started by: alisrpp
1 Replies

10. Shell Programming and Scripting

Merge files based on both common and uncommon rows

Hi, I have two files A (2190 rows) and file B (1100 rows). I want to merge the contents of two files based on common field, also I need the unmatched rows from file A file A: ABC XYZ PQR file B: >LMN|chr1:11000-12456: >ABC|chr15:176578-187678: >PQR|chr3:14567-15866: output... (3 Replies)
Discussion started by: Diya123
3 Replies
JOIN(1) 						      General Commands Manual							   JOIN(1)

NAME
join - relational database operator SYNOPSIS
join [ options ] file1 file2 DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If one of the file names is the standard input is used. File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in each line. There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con- sists of the common field, then the rest of the line from file1, then the rest of the line from file2. Input fields are normally separated spaces or tabs; output fields by space. In this case, multiple separators count as one, and leading separators are discarded. The following options are recognized, with POSIX syntax. -a n In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2. -v n Like -a, omitting output for paired lines. -e s Replace empty output fields by string s. -1 m -2 m Join on the mth field of file1 or file2. -jn m Archaic equivalent for -n m. -ofields Each output line comprises the designated fields. The comma-separated field designators are either 0, meaning the join field, or have the form n.m, where n is a file number and m is a field number. Archaic usage allows separate arguments for field designators. -tc Use character c as the only separator (tab character) on input and output. Every appearance of c in a line is significant. EXAMPLES
sort /adm/users | join -t: -a 1 -e "" - bdays Add birthdays to password information, leaving unknown birthdays empty. The layout of is given in users(6); bdays contains sorted lines like tr : ' ' </adm/users | sort -k 3 3 >temp join -1 3 -2 3 -o 1.1,2.1 temp temp | awk '$1 < $2' Print all pairs of users with identical userids. SOURCE
/sys/src/cmd/join.c SEE ALSO
sort(1), comm(1), awk(1) BUGS
With default field separation, the collating sequence is that of sort -b -ky,y; with -t, the sequence is that of sort -tx -ky,y. One of the files must be randomly accessible. JOIN(1)
All times are GMT -4. The time now is 11:36 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy