Here is the output ofod -c /path/to/f1. Thank you .
Code:
0000000 I o n C o d e _ 0 4 0 4 0 0 -
0000020 0 0 0 0 - x x x - x x x - x x x
0000040 \n I o n C o d e _ 0 4 0 2 1 1
0000060 - 1 1 1 1 - y y - y y - y y y \n
0000100 R _ 2 0 1 9 _ 0 0 _ 0 0 _ 0 0 _
0000120 0 0 _ 0 0 _ x x x x _ x x 1 - 1
0000140 2 7 - x x x _ x x x _ x x x _ x
0000160 x x _ x x _ x x _ x x \n \n I o n
0000200 C o d e _ 0 4 0 2 2 2 - 2 2 2
0000220 2 - z z - z z z z - z z z \n R _
0000240 2 0 1 9 _ 0 0 _ 0 0 _ 0 0 _ 0 0
0000260 _ 0 0 _ x x x x _ x x 1 - 1 2 6
0000300 - x x x _ x x x _ x x x _ x x x
0000320 _ x x _ x x _ x x \n \n I o n C o
0000340 d e _ 0 4 0 4 1 0 - 0 0 0 0 -
0000360 a a - a a - a a \n I o n C o d e
0000400 _ 0 4 1 2 5 5 - 1 1 1 1 - b b
0000420 - b b b - b b b \n R _ 2 0 1 9 _
0000440 0 0 _ 0 0 _ 0 0 _ 0 0 _ 0 0 _ x
0000460 x x x _ x x 1 - 1 2 0 - x x x _
0000500 x x x _ x x x _ x x x _ x x _ x
0000520 x _ x x \n
Hi,
I am having file which contains around 15 columns, i need to fetch column 3,12,14 based on the condition that column 3 starts with 40464
this is the sample data
how to achieve that (3 Replies)
I’m trying to modify someone perl script to fix a bug. The piece of code checks that the zone name you want to add is unique. However, when the code runs, it finds a partial match using grep, and decides it already exists, so the “create” command exits.
$cstatus = `${ZADM} list -vic | grep... (3 Replies)
Hi, I was trying to figure this out but failed so I hope someone here can help me, thank you in advance.
I have two files.
file1: aa M
bb N
cc O
dd P
ee Q file2: aa A_87_P254063
cc A_87_P016532
bb A_87_P104793
dd A_87_P055331
ee A_87_P059706
aa A_87_P071636
ee A_87_P028302... (2 Replies)
Hi I have a question and hope I can get answer here. Thank you in advance.
I have two files:
file1:
aa X
bb Y
cc Z
file2:
cc A
bb B
dd C
aa D
bb E
If the 1st column match in both file1 and file2, the 2nd column in file2 will be replaced by the 2nd column in file1. If there is no... (2 Replies)
I posted the incorrect files yesterday and apologize. I also modified the awk script but with no luck. There are two text files in the zip (name.txt and output.txt). I am trying to match $2 in name.txt with $1 in output.txt and if they match then $1 of name.txt is copied to $7 of output.txt. ... (7 Replies)
I have a specific set (all ending with .bam) of downloaded files in a directory /home/cmccabe/Desktop/NGS/API/2-15-2016. What I am trying to do is use a match to $2 in name to rename the downloaded files. To make things a more involved the date of the folder is unique and in the header of name... (1 Reply)
Hi All,
I have 100 folders with the first delimiter has a unique name i.e (123_hello and 575_hello) and each folder have atlist 1000 plus files with naming convention i.e (575_hello_1.iso ... 575_hello_1000.iso).
575_hello/575_hello_1.iso
575_hello/575_hello_2.iso
575_hello/575_hello_3.iso... (8 Replies)
Hi, I have a tab delimited text file like this one. I need to do a partial match of a particular cell and then replace matches with an empty cell. So here is a sample:
Smith FordMustang ChevroletCamaro
Miller FordFiesta
Jones KiaSorrento
Davis ChevroletCamaro
Johnson ToyotaHighlander
I... (4 Replies)
I am trying to create a cronjob that will run on startup that will look at a list.txt file to see if there is a later version of a database using database.txt as the source. The matching lines are written to output.
$1 in database.txt will be in list.txt as a partial match. $2 of database.txt... (2 Replies)
In the portion of bash below I am using rename to match the $id variable to $file and when a match (there will alwsys be one) is found then the $id is removed from each bam and bam.bai in $file and _test is added to thee file name before the extension. Each of the variables is set correctly but... (3 Replies)
Discussion started by: cmccabe
3 Replies
LEARN ABOUT DEBIAN
lfc_statg
LFC_STATG(3) LFC Library Functions LFC_STATG(3)NAME
lfc_statg - get information about a LFC file or directory in the name server
SYNOPSIS
#include <sys/types.h>
#include "lfc_api.h"
int lfc_statg (const char *path, const char *guid, struct lfc_filestatg *statbuf)
int lfc_statr (const char *sfn, struct lfc_filestatg *statbuf)
DESCRIPTION
lfc_statg gets information about a LFC file or directory, having the given GUID, in the name server.
lfc_statr retrieves information about the given replica.
The file can be specified by path name or by guid. If both are given, they must point at the same file.
guid specifies the Grid Unique IDentifier.
path specifies the logical pathname relative to the current LFC directory or the full LFC pathname.
sfn is either the Site URL or the Physical File Name for the replica.
The structure pointed to by statbuf contains the following members:
u_signed64 fileid; /* entry unique identifier */
char guid[CA_MAXGUIDLEN+1] /* GUID */
mode_t filemode; /* see below */
int nlink; /* number of files in a directory */
uid_t uid;
gid_t gid;
u_signed64 filesize;
time_t atime; /* last access to file */
time_t mtime; /* last file modification */
time_t ctime; /* last metadata modification */
short fileclass; /* 1--> experiment, 2 --> user */
char status; /* '-' --> online, 'm' --> migrated */
char csumtype[3];
char csumvalue[33];
filemode is constructed by OR'ing the bits defined in <sys/stat.h> under Unix or "statbits.h" under Windows/NT:
S_IFLNK 0xA000 symbolic link
S_IFREG 0x8000 regular file
S_IFDIR 0x4000 directory
S_ISUID 0004000 set user ID on execution
S_ISGID 0002000 set group ID on execution
S_ISVTX 0001000 sticky bit
S_IRUSR 0000400 read by owner
S_IWUSR 0000200 write by owner
S_IXUSR 0000100 execute/search by owner
S_IRGRP 0000040 read by group
S_IWGRP 0000020 write by group
S_IXGRP 0000010 execute/search by group
S_IROTH 0000004 read by others
S_IWOTH 0000002 write by others
S_IXOTH 0000001 execute/search by others
RETURN VALUE
This routine returns 0 if the operation was successful or -1 if the operation failed. In the latter case, serrno is set appropriately.
ERRORS
ENOENT The named file/directory does not exist or is a null pathname.
EACCES Search permission is denied on a component of the path prefix.
EFAULT path or statbuf is a NULL pointer.
EINVAL The length of the guid component exceeds CA_MAXGUIDLEN or path and guid are both given and they point at a different file.
ENOTDIR A component of path prefix is not a directory.
ENAMETOOLONG The length of path exceeds CA_MAXPATHLEN or the length of a path component exceeds CA_MAXNAMELEN or the length of the sfn
exceeds CA_MAXSFNLEN.
SENOSHOST Host unknown.
SENOSSERV Service unknown.
SECOMERR Communication error.
ENSNACT Name server is not running or is being shutdown.
SEE ALSO Castor_limits(4), lfc_chdir(3), lfc_chmod(3), lfc_chown(3), lfc_creatg(3)AUTHOR
LCG Grid Deployment Team
LFC $Date: 2005/04/28 05:20:20 $ LFC_STATG(3)
10-28-2019
.