I further qualified my question (see #5 above) - this appears to be a problem with the data file.
If the actual renames were done instead of echo, only the first match would apply as the file would then have a different name and the 2nd rename would not be attempted. Red lines will not occur as file has already be renamed on lines 1 and 2:
Last edited by Chubler_XL; 10-24-2019 at 05:26 PM..
This User Gave Thanks to Chubler_XL For This Post:
Hi,
I am having file which contains around 15 columns, i need to fetch column 3,12,14 based on the condition that column 3 starts with 40464
this is the sample data
how to achieve that (3 Replies)
I’m trying to modify someone perl script to fix a bug. The piece of code checks that the zone name you want to add is unique. However, when the code runs, it finds a partial match using grep, and decides it already exists, so the “create” command exits.
$cstatus = `${ZADM} list -vic | grep... (3 Replies)
Hi, I was trying to figure this out but failed so I hope someone here can help me, thank you in advance.
I have two files.
file1: aa M
bb N
cc O
dd P
ee Q file2: aa A_87_P254063
cc A_87_P016532
bb A_87_P104793
dd A_87_P055331
ee A_87_P059706
aa A_87_P071636
ee A_87_P028302... (2 Replies)
Hi I have a question and hope I can get answer here. Thank you in advance.
I have two files:
file1:
aa X
bb Y
cc Z
file2:
cc A
bb B
dd C
aa D
bb E
If the 1st column match in both file1 and file2, the 2nd column in file2 will be replaced by the 2nd column in file1. If there is no... (2 Replies)
I posted the incorrect files yesterday and apologize. I also modified the awk script but with no luck. There are two text files in the zip (name.txt and output.txt). I am trying to match $2 in name.txt with $1 in output.txt and if they match then $1 of name.txt is copied to $7 of output.txt. ... (7 Replies)
I have a specific set (all ending with .bam) of downloaded files in a directory /home/cmccabe/Desktop/NGS/API/2-15-2016. What I am trying to do is use a match to $2 in name to rename the downloaded files. To make things a more involved the date of the folder is unique and in the header of name... (1 Reply)
Hi All,
I have 100 folders with the first delimiter has a unique name i.e (123_hello and 575_hello) and each folder have atlist 1000 plus files with naming convention i.e (575_hello_1.iso ... 575_hello_1000.iso).
575_hello/575_hello_1.iso
575_hello/575_hello_2.iso
575_hello/575_hello_3.iso... (8 Replies)
Hi, I have a tab delimited text file like this one. I need to do a partial match of a particular cell and then replace matches with an empty cell. So here is a sample:
Smith FordMustang ChevroletCamaro
Miller FordFiesta
Jones KiaSorrento
Davis ChevroletCamaro
Johnson ToyotaHighlander
I... (4 Replies)
I am trying to create a cronjob that will run on startup that will look at a list.txt file to see if there is a later version of a database using database.txt as the source. The matching lines are written to output.
$1 in database.txt will be in list.txt as a partial match. $2 of database.txt... (2 Replies)
In the portion of bash below I am using rename to match the $id variable to $file and when a match (there will alwsys be one) is found then the $id is removed from each bam and bam.bai in $file and _test is added to thee file name before the extension. Each of the variables is set correctly but... (3 Replies)
Discussion started by: cmccabe
3 Replies
LEARN ABOUT DEBIAN
xml::generator::dom
DOM(3pm) User Contributed Perl Documentation DOM(3pm)NAME
XML::Generator::DOM - XML::Generator subclass for producing DOM trees instead of strings.
SYNOPSIS
use XML::Generator::DOM;
my $dg = XML::Generator::DOM->new();
my $doc = $dg->xml($dg->xmlcmnt("Test document."),
$dg->foo({'baz' => 'bam'}, 42));
print $doc->toString;
yields:
<?xml version="1.0" standalone="yes"?>
<!--Test document-->
<foo baz="bam">42</foo>
DESCRIPTION
XML::Generator::DOM subclasses XML::Generator in order to produce DOM trees instead of strings (see XML::Generator and XML::DOM). This
module is still experimental and its semantics might change.
Essentially, tag methods return XML::DOM::DocumentFragment objects, constructed either from a DOM document passed into the constructor or a
default document that XML::Generator::DOM will automatically construct.
Calling the xml() method will return this automatically constructed document and cause a fresh one to be constructed for future tag method
calls. If you passed in your own document, you may not call the xml() method.
Below, we just note the remaining differences in semantics between XML::Generator methods and XML::Generator::DOM methods.
CONSTRUCTOR
These configuration options are accepted but have no effect on the semantics of the returned object: escape, pretty, conformance and empty.
TAG METHODS
Subsequently, tag method semantics are somewhat different for this module compared to XML::Generator. The primary difference is that tag
method return XML::DOM::DocumentFragment objects. Namespace and attribute processing remains the same, but remaining arguments to tag
methods must either be text or other XML::DOM::DocumentFragment objects. No escape processing, syntax checking, or output control is done;
this is all left up to XML::DOM.
SPECIAL TAGS
All special tags are available by default with XML::Generator::DOM; you don't need to use 'conformance' => 'strict'.
xmlpi(@args)
Arguments will simply be concatenated and passed as the data to the XML::DOM::ProcessingInstruction object that is returned.
xmlcmnt
Escaping of '--' is done by XML::DOM::Comment, which replaces both hyphens with '-'. An XML::DOM::Comment object is returned.
xmldecl
Returns an XML::DOM::XMLDecl object. Respects 'version', 'encoding' and 'dtd' settings in the object.
xmldecl
Returns an XML::DOM::DocumentType object.
xmlcdata
Returns an XML::DOM::CDATASection object.
xml
As described above, xml() can only be used when dom_document was not set in the object. The automatically created document will have its
XML Declaration set and the arguments to xml() will be appended to it. Then a new DOM document is automatically generated and the old one
is returned. This is the only way to get a DOM document from this module.
perl v5.12.4 2004-03-23 DOM(3pm)