I tried it two ways both resulting in file or directory not found, but I can manually ssh to them. This is not the full code but I hope it's enough as I don't want to post code that is not needed. Thank you .
attempt 1
Code:
# match unique run in list and extract samples
run=$(awk -F '\n' -v RS="" -v ref="$s5" '$0 ~ ref {d=split($0, val, " "); for(i=2;i<d;i+=2) printf "%s ",val[i]; printf "\n"}' list)
# create array of samples from $run
readarray -t array <<< "$(printf '%s\n' $run)"
for ((i=0; i<${#array[@]}; i++ )) ; do
echo "${array[$i]}"
done
# loop through array and append with ID
for ID in "${array[@]}" ; do
"( cd /path/to/${ID}*/*/folder && exec sshpass -f file.txt scp xxx@xxx.xx.xx.xxx:path/to/destination/${ID}-cn_results.png )"
done | sshpass -f out.txt ssh -o strictHostKeyChecking=no -t xxxx@xxx.xx.xxx.xx
attempt 2
Code:
# match unique run in list and extract samples
run=$(awk -F '\n' -v RS="" -v ref="$s5" '$0 ~ ref {d=split($0, val, " "); for(i=2;i<d;i+=2) printf "%s ",val[i]; printf "\n"}' list)
# create array of samples from $run
readarray -t array <<< "$(printf '%s\n' $run)"
for ((i=0; i<${#array[@]}; i++ )) ; do
echo "${array[$i]}"
done
# loop through array and append with ID
for ID in "${array[@]}" ; do
"( cd /path/to/${ID}*/*/folder && exec sshpass -f file.txt scp "$ID" xxx@xxx.xx.xx.xxx:path/to/destination/"${ID%}"-cn_results.png )"
done | sshpass -f out.txt ssh -o strictHostKeyChecking=no -t xxxx@xxx.xx.xxx.xx
attempt 1 error:
Code:
script.sh: line 39: ( cd /path/to/ID1*/*/folder && exec sshpass -f file.txt scp -- *.png* xxx@xxx.xx.xx.xxx:path/to/destination/ID1-cn_results.png ): No such file or directory
script.sh: line 39: ( cd /path/to/ID2*/*/folder && exec sshpass -f file.txt scp -- *.png* xxx@xxx.xx.xx.xxx:path/to/destination/ID2-cn_results.png ): No such file or directory
attempt 2 error: --- in the server these exsist as ID1-xxxx-xxxxxxx-xxxxxx so I added * but thats not expanding it seems ----
Code:
ID1: No such file or directory
ID2: No such file or directory
Last edited by cmccabe; 10-16-2019 at 01:40 PM..
Reason: fixed format
Hi,
I'm trying to write a function that redirects the contents of an
array to a file. The array contains the lines of a data file with
white space.
The function seems to preserve all white space when redirected
except that it seems to ignore newlines. As a consequence, the
elements of the... (7 Replies)
Hi Guys,
I have a file which has numbers in it separated by newlines as follows:
1.113
1.456
0.556
0.021
-0.541
-0.444
I am using the following code to store these in an array in bash:
FILE14=data.txt
ARRAY14=(`awk '{print}' $FILE14`) (6 Replies)
I have one file "file.a.b.c-d.r" that I would like to use to spawn 4 other files:
"file.a.b.1-A.r"
"file.a.b.1-B.r"
"file.a.b.1-C.r"
"file.a.b.1-D.r"
where the field "c-d" changes into my 1 and A-D.
I was doing this manually at the prompt with
> cp "file.a.b.c-d.r" "file.a.b.1-A.r"
>... (13 Replies)
I have figured out how to grep the file like this:
echo `grep $(date +'%Y-%m-%d') Cos-01.csv | cut -d',' -f1`
The above line does echo the correct information from the lines in which my search criteria is found.
Now I am trying to get that information (Yes, just one column of every line) into... (6 Replies)
Writing a bash script for use with Geektool, pulls the battery info, and shuffles images around so that an Image geeklet can display the correct expression as the desktop background. (Eventually I intend to make it more intricate, based on more variables, and add more expressions)
I'm extremely... (1 Reply)
Hi,
I'm trying to write a bash script that takes a file and passes each line from the file into an array with elements separated by column.
For example:
Sample file "file1.txt":
1 name1 a first
2 name2 b second
3 name3 c third
and have arrays such as:
line1 = ( "1" "name1" "a"... (3 Replies)
for a in {1..100}
do
awk '{ sum+=$a} END {print sum}' a=$a file1 > file2
done
I know I will get only one number if following the code above, how can I get 100 sum numbers in file2? (2 Replies)
I'm working on a bash script to finish uploading a file.
I need a way to get $filesize so that "restart $filesize" will work.
Here is my script:
ftp -n -v <<END_SCRIPT
open ftp.$domain
user $user@$domain $password
size $file
restart $filesize
put $file
quit
END_SCRIPTWayne Sallee... (9 Replies)
Hi Team,
i have a web ui where user will be passing values and the output will be saved to a file say test with the following contents .
These below mentioned values will change according to the user_input
Just gave here one example
Contents of file test is given below
Gateway... (7 Replies)
Hi guys and gals...
MacBook Pro.
OSX 10.13.2, default bash terminal.
I have a flat file 1920 bytes in size of whitespaces only. I need to put every single whitespace character into a bash array cell.
Below are two methods that work, but both are seriously ugly.
The first one requires that I... (7 Replies)
Discussion started by: wisecracker
7 Replies
LEARN ABOUT LINUX
rbash
RBASH(1) General Commands Manual RBASH(1)NAME
rbash - restricted bash, see bash(1)RESTRICTED SHELL
If bash is started with the name rbash, or the -r option is supplied at invocation, the shell becomes restricted. A restricted shell is
used to set up an environment more controlled than the standard shell. It behaves identically to bash with the exception that the follow-
ing are disallowed or not performed:
o changing directories with cd
o setting or unsetting the values of SHELL, PATH, ENV, or BASH_ENV
o specifying command names containing /
o specifying a file name containing a / as an argument to the . builtin command
o specifying a filename containing a slash as an argument to the -p option to the hash builtin command
o importing function definitions from the shell environment at startup
o parsing the value of SHELLOPTS from the shell environment at startup
o redirecting output using the >, >|, <>, >&, &>, and >> redirection operators
o using the exec builtin command to replace the shell with another command
o adding or deleting builtin commands with the -f and -d options to the enable builtin command
o using the enable builtin command to enable disabled shell builtins
o specifying the -p option to the command builtin command
o turning off restricted mode with set +r or set +o restricted.
These restrictions are enforced after any startup files are read.
When a command that is found to be a shell script is executed, rbash turns off any restrictions in the shell spawned to execute the script.
SEE ALSO bash(1)GNU Bash-4.0 2004 Apr 20 RBASH(1)
10-16-2019
.