Sponsored Content
Top Forums UNIX for Beginners Questions & Answers Find lines with duplicate values in a particular column Post 303039651 by RudiC on Friday 11th of October 2019 03:40:33 AM
Old 10-11-2019
Given your uniq provides all the options shown, try
Code:
sort -k4,4 file | uniq -D -f3 -w5
40993876    4531    724    10154    Strep A
40993878    4533    724    10154    Strep B
40991764    2419    724    47182    Cand A
40992936    3591    724    47182    Cand B
40993016    3671    724    47182    Cand C

This User Gave Thanks to RudiC For This Post:
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

have to retrieve the distinct values (not duplicate) from 2nd column and display

I have a text file names test2 with 3 columns as below . We have to retrieve the distinct values (not duplicate) from 2nd column and display. I have used the below command but giving some error. NS3303 NS CRAFT LTD NS3303 NS CHIRON VACCINES LTD NS3303 NS ALLIED MEDICARE LTD NS3303 NS... (16 Replies)
Discussion started by: shirdi
16 Replies

2. Shell Programming and Scripting

Find and replace duplicate column values in a row

I have file which as 12 columns and values like this 1,2,3,4,5 a,b,c,d,e b,c,a,e,f a,b,e,a,h if you see the first column has duplicate values, I need to identify (print it to console) the duplicate value (which is 'a') and also remove duplicate values like below. I could be in two... (5 Replies)
Discussion started by: nuthalapati
5 Replies

3. Shell Programming and Scripting

Perl: filtering lines based on duplicate values in a column

Hi I have a file like this. I need to eliminate lines with first column having the same value 10 times. 13 18 1 + chromosome 1, 122638287 AGAGTATGGTCGCGGTTG 13 18 1 + chromosome 1, 128904080 AGAGTATGGTCGCGGTTG 13 18 1 - chromosome 14, 13627938 CAACCGCGACCATACTCT 13 18 1 + chromosome 1,... (5 Replies)
Discussion started by: polsum
5 Replies

4. UNIX for Dummies Questions & Answers

[SOLVED] remove lines that have duplicate values in column two

Hi, I've got a file that I'd like to uniquely sort based on column 2 (values in column 2 begin with "comp"). I tried sort -t -nuk2,3 file.txtBut got: sort: multi-character tab `-nuk2,3' "man sort" did not help me out Any pointers? Input: Output: (5 Replies)
Discussion started by: pathunkathunk
5 Replies

5. Shell Programming and Scripting

Check to identify duplicate values at first column in csv file

Hello experts, I have a requirement where I have to implement two checks on a csv file: 1. Check to see if the value in first column is duplicate, if any value is duplicate script should exit. 2. Check to verify if the value at second column is between "yes" or "no", if it is anything else... (4 Replies)
Discussion started by: avikaljain
4 Replies

6. Shell Programming and Scripting

Get the average from column, and eliminate the duplicate values.

Dear Experts, Kindly help me please, I have a big file where there is duplicate values in col 11 till col 23, every 2 rows appers a new numbers, but in each row there is different coordinates x and y in col 57 till col 74. Please i will like to get a single value and average of the x and y... (8 Replies)
Discussion started by: jiam912
8 Replies

7. Shell Programming and Scripting

Identify duplicate values at first column in csv file

Input 1,ABCD,no 2,system,yes 3,ABCD,yes 4,XYZ,no 5,XYZ,yes 6,pc,noCode used to find duplicate with regard to 2nd column awk 'NR == 1 {p=$2; next} p == $2 { print "Line" NR "$2 is duplicated"} {p=$2}' FS="," ./input.csv Now is there a wise way to de-duplicate the entire line (remove... (4 Replies)
Discussion started by: deadyetagain
4 Replies

8. Shell Programming and Scripting

Filter file to remove duplicate values in first column

Hello, I have a script that is generating a tab delimited output file. num Name PCA_A1 PCA_A2 PCA_A3 0 compound_00 -3.5054 -1.1207 -2.4372 1 compound_01 -2.2641 0.4287 -1.6120 3 compound_03 -1.3053 1.8495 ... (3 Replies)
Discussion started by: LMHmedchem
3 Replies

9. Shell Programming and Scripting

Remove duplicate values in a column(not in the file)

Hi Gurus, I have a file(weblog) as below abc|xyz|123|agentcode=sample code abcdeeess,agentcode=sample code abcdeeess,agentcode=sample code abcdeeess|agentadd=abcd stereet 23343,agentadd=abcd stereet 23343 sss|wwq|999|agentcode=sample1 code wqwdeeess,gentcode=sample1 code... (4 Replies)
Discussion started by: ratheeshjulk
4 Replies

10. Shell Programming and Scripting

Find duplicate values in specific column and delete all the duplicate values

Dear folks I have a map file of around 54K lines and some of the values in the second column have the same value and I want to find them and delete all of the same values. I looked over duplicate commands but my case is not to keep one of the duplicate values. I want to remove all of the same... (4 Replies)
Discussion started by: sajmar
4 Replies
UNIQ(1) 							   User Commands							   UNIQ(1)

NAME
uniq - report or omit repeated lines SYNOPSIS
uniq [OPTION]... [INPUT [OUTPUT]] DESCRIPTION
Discard all but one of successive identical lines from INPUT (or standard input), writing to OUTPUT (or standard output). Mandatory arguments to long options are mandatory for short options too. -c, --count prefix lines by the number of occurrences -d, --repeated only print duplicate lines -D, --all-repeated[=delimit-method] print all duplicate lines delimit-method={none(default),prepend,separate} Delimiting is done with blank lines. -f, --skip-fields=N avoid comparing the first N fields -i, --ignore-case ignore differences in case when comparing -s, --skip-chars=N avoid comparing the first N characters -u, --unique only print unique lines -z, --zero-terminated end lines with 0 byte, not newline -w, --check-chars=N compare no more than N characters in lines --help display this help and exit --version output version information and exit A field is a run of blanks (usually spaces and/or TABs), then non-blank characters. Fields are skipped before chars. Note: 'uniq' does not detect repeated lines unless they are adjacent. You may want to sort the input first, or use `sort -u' without `uniq'. AUTHOR
Written by Richard M. Stallman and David MacKenzie. REPORTING BUGS
Report uniq bugs to bug-coreutils@gnu.org GNU coreutils home page: <http://www.gnu.org/software/coreutils/> General help using GNU software: <http://www.gnu.org/gethelp/> COPYRIGHT
Copyright (C) 2009 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>. This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. SEE ALSO
The full documentation for uniq is maintained as a Texinfo manual. If the info and uniq programs are properly installed at your site, the command info coreutils 'uniq invocation' should give you access to the complete manual. GNU coreutils 7.1 July 2010 UNIQ(1)
All times are GMT -4. The time now is 05:46 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy