awk remote multiple hosts print remote hostname and output
Hi all,
i'm trying to gether multiple pattern on remote hosts, and trying to print hostname and the pattern,
The output is the following,
I need to output the following format
Hi all,
Have used ftp to transfer files from remote host to localhost.
I was wondering how can I ftp into remote hosts.
for example from a unix box, connect to an external server and then ftp that file into mainframe ? I would like to avoid pulling it to unix box and then ftping to mainframe.... (1 Reply)
Hi gurus of unix!!!!, I have a little question. I nedd your helps
The scenarios is the following
I have tree equipment that are installed in different places. I use a carrier to interconnect the equipment.
Some Port's (TCP) need to be open for an application that must be function correctly.
For... (3 Replies)
Hi,
I've been looking for a way to execute a console program (is in windows but by now I accept the linux way) from a linux machine, but this program has to be opened in the remote side. Linux machine acts only as a "signaling" host. My program has to open the camera in the remote side, but only... (7 Replies)
Hello forum:
I am curious about some output that I get using an alias <command> on a remote host and I wondered if someone could point me in the right direction.
Symptoms:
Using "ssh -qi /path/to/key root@som.ipa.ddr.ess mail" (or variation of via alias)
only gives a partial textual... (7 Replies)
I have a script on about 15 hosts that I need to run for each host whenever I want (not crontab). Problem is, this script takes 5-10 mins to run for each host. Is there a way I can run the script in parallel for all the hosts instead of 1 at a time? Also, I'm remotely running the script on the... (3 Replies)
so i'm doing something similar to this:
ssh myname@remotehost 'tail -800 /var/log/some.log'
Now, as you can see, this is a lot of data to be passing back and forth over a network.
Is there anything i can do to make the output smaller (zip it on the fly, compress?) and then when the data... (4 Replies)
Hello,
I am trying to login to multiple servers and i have to run multiple loops to gather some details..Could you please help me out.
I am specifically facing issues while running for loops.
I have to run multiple for loops in else condition. but the below code is giving errors in for... (2 Replies)
Dear Folks,
I am trying to read a config file contains ip and port numbers.
i want to read each line of the config file and check ssh connection is happening or not.
Kindly guide.
Config file:
abc@1.2.342 22
abc@1.2.343 22
abc@1.2.344 22
abc@1.2.345 22... (9 Replies)
Am trying to copy a tar file onto a series of remote hosts and untar it at the destination. Need to do this without having to do multiple ssh.
Actions to perform within a single ssh session via shell script
- copy a file
- untar at destination (remote host)
OS : Linux RHEL6 (3 Replies)
Hello all,
i'm trying to create a report by greping a pattern on multiple remote hosts and creta a simple report,
actually i did this, is ther any better way to do this.
#!/bin/bash
for host in `cat RemoteHosts`
do
ssh $host -C 'hostname 2>&1; grep ERROR /var/log/WebServer.log.2019-09-21... (0 Replies)
Discussion started by: charli1
0 Replies
LEARN ABOUT DEBIAN
bio::search::hit::blasthit
Bio::Search::Hit::BlastHit(3pm) User Contributed Perl Documentation Bio::Search::Hit::BlastHit(3pm)NAME
Bio::Search::Hit::BlastHit - Blast-specific subclass of Bio::Search::Hit::GenericHit
SYNOPSIS
use Bio::Search::Hit::BlastHit;
my $hit = Bio::Search::Hit::BlastHit->new(-algorithm => 'blastp');
# See Bio::Search::Hit::GenericHit for information about working with Hits.
# TODO: Describe how to configure a SearchIO stream so that it generates # GenericHit objects.
DESCRIPTION
This object is a subclass of Bio::Search::Hit::GenericHit and provides some operations that facilitate working with BLAST and PSI-BLAST
Hits.
For general information about working with Hits, see Bio::Search::Hit::GenericHit.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Jason Stajich and Steve Chervitz
Email jason@bioperl.org Email sac@bioperl.org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::Search::Hit::GenericHit->new();
Function: Builds a new Bio::Search::Hit::GenericHit object
Returns : Bio::Search::Hit::GenericHit
Args : See Bio::Search::Hit::GenericHit() for other args.
Here are the BLAST-specific args that can be used when
creating BlastHit objects:
-iteration => integer for the PSI-Blast iteration number
-found_again => boolean, true if hit appears in a
"previously found" section of a PSI-Blast report.
iteration
Usage : $hit->iteration( $iteration_num );
Purpose : Gets the iteration number in which the Hit was found.
Example : $iteration_num = $sbjct->iteration();
Returns : Integer greater than or equal to 1
Non-PSI-BLAST reports will report iteration as 1, but this number
is only meaningful for PSI-BLAST reports.
Argument : iteration_num (optional, used when setting only)
Throws : none
See Also : found_again()
found_again
Title : found_again
Usage : $hit->found_again;
$hit->found_again(1);
Purpose : Gets a boolean indicator whether or not the hit has
been found in a previous iteration.
This is only applicable to PSI-BLAST reports.
This method indicates if the hit was reported in the
"Sequences used in model and found again" section of the
PSI-BLAST report or if it was reported in the
"Sequences not found previously or not previously below threshold"
section of the PSI-BLAST report. Only for hits in iteration > 1.
Example : if( $hit->found_again()) { ... };
Returns : Boolean, true(1) if the hit has been found in a
previous PSI-BLAST iteration.
Returns false (0 or undef) for hits that have not occurred in a
previous PSI-BLAST iteration.
Argument : Boolean (1 or 0). Only used for setting.
Throws : none
See Also : iteration()
perl v5.14.2 2012-03-02 Bio::Search::Hit::BlastHit(3pm)