Hi,
On a similar subject, the following. I have two files:
file1.txt
dbSNP_rsID,Chromosome,Position,Gene
rs10399749,chr. 01,45162,?
rs4030303,chr. 01,72434,?
rs4030300,chr. 01,72515,?
rs940550,chr. 01,78032,?
rs13328714,chr. 01,81468,?
rs11490937,chr. 01,222077,?
rs6683466,chr.... (5 Replies)
Dear Forum,
Full title of the topic would be: "Join 3 or more files using matching column without full list in any of these columns"
I have several, typically 3 or 4 files which I need to join, something like FULL JOIN in slq scripts, all combinations of matches should be printed into an... (3 Replies)
i have a file named keyword.csv(contains around 8k records) which contains a no. of columns.
The 5th column contains all the keywords.
I want to recursively search these keywords in all .pl files(around 1k) and display the filename....Afterthat i will use the filename and some of the column from... (3 Replies)
Hi,
Please excuse for often requesting queries and making R&D, I am trying to work out a possibility where i have two files field separated by pipe and another file containing only one field where there is no matching columns, Could you please advise how to merge two files.
$more... (3 Replies)
I have 2 files. File 1 has more columns (6 columns but the last column has spaces) than file 2 (file 2 has 4 columns). The entries in file 1 do not change but column 4 in file 2 can be different from the the entry in file 1. I want to create a script that reads in file 1 and then uses column 1 2... (5 Replies)
Hi all
I have a great challenge that I am not able to resolve.
Briefly, I have a file like this:
ID_1 chr1 100 -
ID_2 chr2 300 +
and another file like this:
name_1 chr1 150 no -
name_2 chr1 250 yes -
name_3 chr2 350 yes +
name_4 chr2 280 yes +
Well, for each entry in file1 I would... (2 Replies)
Hi,
I hope somebody can help me with this problem, since I would like to solve this problem using awk, but im not experienced enough with this.
I have two files which i want to match, and output the matching column name and row number.
One file contains 4 columns like this:
FILE1:
a ... (6 Replies)
there can be n number of columns but the number of columns and header name will remain same in all 3 files. Files are tab Delimited.
a.txt
Name 9/1 9/2
X 1 7
y 2 8
z 3 9
a 4 10
b 5 11
c 6 12
b.xt
Name 9/1 9/2
X 13 19
y 14 20
z 15 21
a 16 22
b 17 23
c 18 24 c.txt
Name 9/1 9/2... (14 Replies)
First I'd like to apologize if I opened a thread which is already open somewhere.
I did a bit of searching but could quite find what I was looking for, so I will try to explaing what I need.
I'm writing a script on our server, got to a point where I have two files with results. Example:
File1... (6 Replies)
I have 3 files. Each of those files have the same number of records, however certain records have different values. I would like to grep the field in ALL 3 files and display the output with only the differences in column wise and if possible line number
File1
Name = Joe
Age = 33... (3 Replies)
Discussion started by: sidnow
3 Replies
LEARN ABOUT DEBIAN
mcxalter
mcxalter(1) USER COMMANDS mcxalter(1)
NAME
mcxalter - various network transformations
SYNOPSIS
mcxalter [-imx <fname> (specify matrix input)] [-abc <fname> (specify label input)] [-tab <fname> (use tab file)] [-o <fname> (output)] [-tf
spec (apply tf-spec to input matrix)]
DESCRIPTION
This utility supplies various transformations of networks.
OPTIONS
-abc <fname> (label input)
The file name for input that is in label format.
-imx <fname> (input matrix)
The file name for input that is in mcl native matrix format.
-tab <fname> (use tab file)
This option causes the output to be printed with the labels found in the tab file. With -abc this option will, additionally, construct a
graph only on the labels found in the tab file. If this option is used in conjunction with -imx the tab domain and the matrix domain are
required to be identical.
-tf <tf-spec> (transform input matrix values)
Transform the input matrix values according to the syntax described in mcxio(5).
-o fname (output file)
Output file.
AUTHOR
Stijn van Dongen.
SEE ALSO
mcxio(5), mcx(1), mcxsubs(1), and mclfamily(7) for an overview of all the documentation and the utilities in the mcl family.
mcxalter 12-068 8 Mar 2012 mcxalter(1)