I want to use print combine lines of both files where column 1 of file1 matches column 1 of file2 and column 2 of file1 is >= column4 of file2 and column 3 of file1 is <= column 5 of file2.
My expected output in the example is
Your help is well appreciated.
Last edited by Scrutinizer; 09-19-2019 at 01:41 AM..
Reason: code tags
Hi,
On a similar subject, the following. I have two files:
file1.txt
dbSNP_rsID,Chromosome,Position,Gene
rs10399749,chr. 01,45162,?
rs4030303,chr. 01,72434,?
rs4030300,chr. 01,72515,?
rs940550,chr. 01,78032,?
rs13328714,chr. 01,81468,?
rs11490937,chr. 01,222077,?
rs6683466,chr.... (5 Replies)
Dear Forum,
Full title of the topic would be: "Join 3 or more files using matching column without full list in any of these columns"
I have several, typically 3 or 4 files which I need to join, something like FULL JOIN in slq scripts, all combinations of matches should be printed into an... (3 Replies)
i have a file named keyword.csv(contains around 8k records) which contains a no. of columns.
The 5th column contains all the keywords.
I want to recursively search these keywords in all .pl files(around 1k) and display the filename....Afterthat i will use the filename and some of the column from... (3 Replies)
Hi,
Please excuse for often requesting queries and making R&D, I am trying to work out a possibility where i have two files field separated by pipe and another file containing only one field where there is no matching columns, Could you please advise how to merge two files.
$more... (3 Replies)
I have 2 files. File 1 has more columns (6 columns but the last column has spaces) than file 2 (file 2 has 4 columns). The entries in file 1 do not change but column 4 in file 2 can be different from the the entry in file 1. I want to create a script that reads in file 1 and then uses column 1 2... (5 Replies)
Hi all
I have a great challenge that I am not able to resolve.
Briefly, I have a file like this:
ID_1 chr1 100 -
ID_2 chr2 300 +
and another file like this:
name_1 chr1 150 no -
name_2 chr1 250 yes -
name_3 chr2 350 yes +
name_4 chr2 280 yes +
Well, for each entry in file1 I would... (2 Replies)
Hi,
I hope somebody can help me with this problem, since I would like to solve this problem using awk, but im not experienced enough with this.
I have two files which i want to match, and output the matching column name and row number.
One file contains 4 columns like this:
FILE1:
a ... (6 Replies)
there can be n number of columns but the number of columns and header name will remain same in all 3 files. Files are tab Delimited.
a.txt
Name 9/1 9/2
X 1 7
y 2 8
z 3 9
a 4 10
b 5 11
c 6 12
b.xt
Name 9/1 9/2
X 13 19
y 14 20
z 15 21
a 16 22
b 17 23
c 18 24 c.txt
Name 9/1 9/2... (14 Replies)
First I'd like to apologize if I opened a thread which is already open somewhere.
I did a bit of searching but could quite find what I was looking for, so I will try to explaing what I need.
I'm writing a script on our server, got to a point where I have two files with results. Example:
File1... (6 Replies)
I have 3 files. Each of those files have the same number of records, however certain records have different values. I would like to grep the field in ALL 3 files and display the output with only the differences in column wise and if possible line number
File1
Name = Joe
Age = 33... (3 Replies)
Discussion started by: sidnow
3 Replies
LEARN ABOUT OSF1
merge
merge(1)merge(1)NAME
merge - three-way file merge
SYNOPSIS
merge [-Llabel1 [-Llabel3]] [-p] [-q] file1 file2 file3
DESCRIPTION
merge incorporates all changes that lead from file2 to file3 into file1. The result goes to standard output if -p is present, into file1
otherwise. merge is useful for combining separate changes to an original. Suppose file2 is the original, and both file1 and file3 are
modifications of file2. Then merge combines both changes.
An overlap occurs if both file1 and file3 have changes in a common segment of lines. On a few older hosts where diff3 does not support the
-E option, merge does not detect overlaps, and merely supplies the changed lines from file3. On most hosts, if overlaps occur, merge out-
puts a message (unless the -q option is given), and includes both alternatives in the result. The alternatives are delimited as follows:
<<<<<<< file1 lines in file1 ======= lines in file3 >>>>>>> file3
If there are overlaps, the user should edit the result and delete one of the alternatives. If the -L label1 and -L label3 options are
given, the labels are output in place of the names file1 and file3 in overlap reports.
DIAGNOSTICS
Exit status is 0 for no overlaps, 1 for some overlaps, 2 for trouble.
IDENTIFICATION
Author: Walter F. Tichy.
Revision Number: 1.1.6.2; Release Date: 1993/10/07.
Copyright (C) 1982, 1988, 1989 by Walter F. Tichy.
Copyright (C) 1990, 1991 by Paul Eggert.
SEE ALSO diff3(1), diff(1), rcsmerge(1), co(1)merge(1)