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Top Forums UNIX for Beginners Questions & Answers Help getting a code in awk - Want to know how much of the data is covered by entries Post 303037835 by Flebman on Wednesday 14th of August 2019 12:07:10 PM
Old 08-14-2019
Help getting a code in awk - Want to know how much of the data is covered by entries

Here is my data structure.
Code:
# id1    id2    len   start    end
# 9     16792   5475   4181     4232
# 11    16792   2317   1086     1137
# 11    32879   2317      8       60
# 11    32858   2317     10       52
# 11    30670   2317     17       63
# 14    12645    532      3       67
# 14    12645    532    158      222
# 14    11879    532      3      223
# 18    23847    644     64      285
# 18    30160    644     98      285
# 18    30160    644    345      477
# 18    30160    644    516      644

I want to get the coverage of id1 based on its length (column len) considering all entries start and end values. The problem is that the multiple entries can have juxtapose values so considering the values in all entries would overrate the coverage. Also considering the smallest start value and biggest end value doesn't account for all since it can have gaps where not all length is represented.

My expected result should be something like this
Code:
 9 --- 50 / 5475  = 0.009
11 --- 106 / 2317 = 0.046
14 --- 220 / 532  = 0.414
18 --- 481 / 644  = 0.75


Last edited by Scrutinizer; 08-14-2019 at 02:02 PM.. Reason: code tags
 

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MongoDB::OID(3pm)					User Contributed Perl Documentation					 MongoDB::OID(3pm)

NAME
MongoDB::OID - A Mongo ObjectId SYNOPSIS
If no "_id" field is provided when a document is inserted into the database, an "_id" field will be added with a new "MongoDB::OID" as its value. my $id = $collection->insert({'name' => 'Alice', age => 20}); $id will be a "MongoDB::OID" that can be used to retreive or update the saved document: $collection->update({_id => $id}, {'age' => {'$inc' => 1}}); # now Alice is 21 To create a copy of an existing OID, you must set the value attribute in the constructor. For example: my $id1 = MongoDB::OID->new; my $id2 = MongoDB::OID->new(value => $id1->value); Now $id1 and $id2 will have the same value. Warning: at the moment, OID generation is not thread safe. SEE ALSO
Core documentation on object ids: <http://dochub.mongodb.org/core/objectids>. ATTRIBUTES
value The OID value. A random value will be generated if none exists already. It is a 24-character hexidecimal string (12 bytes). Its string representation is the 24-character string. METHODS
to_string my $hex = $oid->to_string; Gets the value of this OID as a 24-digit hexidecimal string. get_time my $date = DateTime->from_epoch(epoch => $id->get_time); Each OID contains a 4 bytes timestamp from when it was created. This method extracts the timestamp. TO_JSON my $json = JSON->new; $json->allow_blessed; $json->convert_blessed; $json->encode(MongoDB::OID->new); Returns a JSON string for this OID. This is compatible with the strict JSON representation used by MongoDB, that is, an OID with the value "012345678901234567890123" will be represented as "{"$oid" : "012345678901234567890123"}". AUTHOR
Kristina Chodorow <kristina@mongodb.org> perl v5.14.2 2011-09-07 MongoDB::OID(3pm)
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