I have a file ehich has multiple create statements as
create abc 123
one
two
create xyz 456
four
five
create nnn 666
six
four
I want to separte each create statement in seperate files (3 Replies)
Hi All,
I have a file ABC.txt and I need to split this file on every 250 rows.
And the file name should be ABC1.txt , ABC2.txt and so on.
I tried with split command
split -l 250 <filename> '<filename>'
but the file name returned was
ABC.txtaa
ABC.txtab.
Please... (8 Replies)
Hi,
I have a big file of 50GB size. I need copy it to a second ftp from a ftp. I am not able to do the full 50GB transfer as it timesout after some time. SO i am trying to split the file into 5gb each 10 files with the below command.
split -b 5368709120 pack.tar.gz backup.gz
After I... (2 Replies)
Hi,
i have a file like this:
1|2|3|4|5|
1|2|8|4|6|
Trailer1|||||
1|2|3|
Trailer2|||
3|4|5|6|
3|4|5|7|
3|4|5|8|
Trailer2|||
I want to generate 3 files out of this based on the trailer record. Trailer record string can be different for each file or it may be same for one or two.
No... (24 Replies)
Hi
I have a file that has multiple sequences; the sequence name is the line starting with '>'. It looks like below:
infile.txt:
>HE_ER
tttggtgccttgactcggattgggggacctcccttgggagatcaatcccctgtcctcctgctctttgctc
cgtgaaaaggatccacctatgacctctagtcctcagacccaccagcccaaggaacatctcaccaatttca
>M7B_Ho_sap... (2 Replies)
Hi,
I have a file of the following syntax that has around 120K records that are tab separated.
input.txt
abc def klm 20 76 . + . klm_mango unix_00000001;
abc def klm 83 84 . + . klm_mango unix_0000103;
abc def klm 415 439 . + . klm_mango unix_00001043;
I am looking for an awk oneliner... (2 Replies)
Hi Gurus
I have to split the incoming source file into multiple file.
File contains some unwanted XML tags also .
Files looks like
some XML tags
FILEHEADERABC 12
--
---
----
EOF
some xml tags
xxxFILEHEADERABC 13
--
---
----
EOF
I have to ignore XML tags and only split file... (6 Replies)
So I have a space delimited file that I'd like to split into multiple files based on multiple column values.
This is what my data looks like
1bc9A02 1 10 1000 FTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNNGVFQSTDTCYVLSFAIIMLNTSLHNPNVKDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPELEHHHHHH
1ku1A02 1 10... (9 Replies)
Hi,
I have multiple files that each contain one column of strings:
File1:
123abc
456def
789ghi
File2:
123abc
456def
891jkl
File3:
234mno
123abc
456def
In total I have 25 of these type of file. (5 Replies)
Hello,
I would like to ask for help with csh script.
An example of an input in .txt file is below, the number of lines varies from file to file and I have 2 or 3 columns with values. I would like to read all the values (probably one by one) and set them to independent unique variables that... (7 Replies)
Discussion started by: FMMOLA
7 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)