I'd try with awk something like
but that doesn't work here and I don't know how to start.
You may want to start reading the man page of the join command. As i see it it does exactly what you want. Note that join expects both input files to be sorted (in regards to the common key you want to use for the join-operation) prior to using them.
Hi all,
I want to get only hidden files(which are start with '.' or '..') information in a current directory. I tried the below command,
$ find . -name "^." -exec ls -la '{}' \;
but it's not working. Can anyone give me your outputs.
Thanks in advance,
Raghu. (5 Replies)
Hello,
I have several files in a specific directory.
A specific string in one file can occur in another files.
If this string is in other files. Then all the files in which this string occured should be deleted and only 1 file should remain with the string.
Example.
file1
ShortName "Blue... (2 Replies)
Hi,
I am new to shell programming and need help. I have File1 with some ID numbers and File2 with ID number and some associated information.
I want to match the ID numbers from File1 to contents in File2 and output a third file which pulls out the ID numbers and the associated information with... (2 Replies)
I have got this piece of csh code that looks into various log files and outputs some parameters
For example, I might have 4 files and want to grep for the lines containing "Best Value"
npt02-z30-sr65-rgdt0p50-dc0p004-16x12drw.log
npt02-z30-sr65-rgdt0p50-dc0p004-16x12drw-run2.log... (6 Replies)
I need to copy a list of files in directory and only files with content DUMMY_B should be copy over to a new directory. How can i do that ? Thanks a lot. (2 Replies)
I am using the below script to remove the rows which contains null values in the 3rd column.My requirement here is want to get the filenames which row is removed .please help me.
#!/usr/bin/sh
Scripts=/ushhquest/data001/Scripts
cd /ushhquest/data011/TgtFiles/MonthlyData
ls CUSTADDR*.txt >... (4 Replies)
hi everyone,
im stuck in here with shell :) can you help me??
i have a directory with alot files (genbank files ... all ended in .gbk ) more than 1000 for sure ... and i want to read each one of them and search for some information and if i found the right one i save in new file with new... (6 Replies)
he following are the files available in my directory
RSK_123_20141113_031500.txt
RSK_123_20141113_081500.txt
RSK_126_20141113_041500.txt
RSK_126_20141113_081800.txt
RSK_128_20141113_091600.txt
Here, "RSK" is file prefix and 123 is a code name and rest is just timestamp of the file when its... (7 Replies)
Hi there, I‘m a newbie in linux (ubuntu) working with several files, some of them containing hundred thousands of lines. I started to extract information out of 2 files, combining them by 1 column: I need a Vlookup-like command that reads sampleID (column 2)(line 2,..line by line) in file 1, looks... (1 Reply)
Discussion started by: Nika
1 Replies
LEARN ABOUT DEBIAN
h5totxt
H5TOTXT(1) h5utils H5TOTXT(1)NAME
h5totxt - generate comma-delimited text from 2d slices of HDF5 files
SYNOPSIS
h5totxt [OPTION]... [HDF5FILE]...
DESCRIPTION
h5totxt is a utility to generate comma-delimited text (and similar formats) from one-, two-, or more-dimensional slices of numeric datasets
in HDF5 files. This way, the data can easily be imported into spreadsheets and similar programs for analysis and visualization.
HDF5 is a free, portable binary format and supporting library developed by the National Center for Supercomputing Applications at the Uni-
versity of Illinois in Urbana-Champaign. A single h5 file can contain multiple data sets; by default, h5totxt takes the first dataset, but
this can be changed via the -d option, or by using the syntax HDF5FILE:DATASET.
By default, the entire dataset is dumped to the output. in row-major order. For 3d datasets, this corresponds to a sequence of yz slices,
in order of increasing x, separated by blank lines. If -T is specified, outputs in the transposed (column-major) order instead
Often, however, you want only a one- or two-dimensional slice of multi-dimensional data. To do this, you specify coordinates in one or
more slice dimensions, via the -xyzt options.
The most basic usage is something like 'h5totxt foo.h5', which will output comma-delimited text to stdout from the data in foo.h5.
OPTIONS -h Display help on the command-line options and usage.
-V Print the version number and copyright info for h5totxt.
-v Verbose output.
-o file
Send text output to file rather than to stdout (the default).
-s sep Use the string sep to separate columns of the output rather than a comma (the default).
-x ix, -y iy, -z iz, -t it
This tells h5totxt to use a particular slice of a multi-dimensional dataset. e.g. -x causes a yz plane (of a 3d dataset) to be
used, at an x index of ix (where the indices run from zero to one less than the maximum index in that direction). Here, x/y/z cor-
respond to the first/second/third dimensions of the HDF5 dataset. The -t option specifies a slice in the last dimension, whichever
that might be. See also the -0 option to shift the origin of the x/y/z slice coordinates to the dataset center.
-0 Shift the origin of the x/y/z slice coordinates to the dataset center, so that e.g. -0 -x 0 (or more compactly -0x0) returns the
central x plane of the dataset instead of the edge x plane. (-t coordinates are not affected.)
-T Transpose the data (interchange the dimension ordering). By default, no transposition is done.
-. numdigits
Output numdigits digits after the decimal point (defaults to 16).
-d name
Use dataset name from the input files; otherwise, the first dataset from each file is used. Alternatively, use the syntax
HDF5FILE:DATASET, which allows you to specify a different dataset for each file. You can use the h5ls command (included with hdf5)
to find the names of datasets within a file.
BUGS
Send bug reports to S. G. Johnson, stevenj@alum.mit.edu.
AUTHORS
Written by Steven G. Johnson. Copyright (c) 2005 by the Massachusetts Institute of Technology.
h5utils March 9, 2002 H5TOTXT(1)