Hi all,
Am new to scripting. So i just need your ideas to help me out. Here goes my requirement.
I have two csv files
1.csv 2.csv
abc,1.24 abc,1
def,2.13 def,1
I need to compare the first column of 1.csv with 2.csv and if matches then need to compare... (2 Replies)
I have been trying to find a good solution for this seemingly simple task for 2 days, and I'm giving up and posting a thread. I hope someone can help me out!
I'm on HPUX, using sqlplus, mailx, awk, have some other tools available, but can't install stuff that isn't already in place (without a... (6 Replies)
Hi All,
I have a random test file: test.txt, size: 146
$ ll test.txt
$ 146 test.txt
Take 1:
$ cat test.txt | gzip > test.txt.gz
$ ll test.txt.gz
$ 124 test.txt.gz
Take 2:
$ gzip test.txt
$ ll test.txt.gz
$ 133 test.txt.gz
As you can see, gzipping a file and piping into gzip... (1 Reply)
Hi Fellows,
I have been struggling to fix an issue in csv records to compose sql statements and have been really losing sleep over it. Here is the problem:
I have csv files in the following pipe-delimited format:
Column1|Column2|Column3|Column4|NEWLINE
Address Type|some descriptive... (4 Replies)
Hi
I have two csv files, with the following formats:
FileA.log:
Application, This occured blah
Application, That occured blah
Application, Also this
AnotherLog, Bob did this
AnotherLog, Dave did that
FileB.log:
Uk, London, Application, datetime, LaterDateTime, Today it had'nt... (8 Replies)
hi, someone to know how can i read a specific column of csv file and search the value in other csv columns if exist the value in the second csv copy entire row with all field in a new csv file. i suppose that its possible using awk but i m not expertise thanks in advance (8 Replies)
Hi,
I am tryng to read from a csv file and based on some grep command output I will modify one of the column in the same csv.
Example:-
Input CSV:-
20120829001415,noneAA,google.com
20120829001415,dfsafds,google.com
20120829001415,noneAA,google.com
Intermediate Step:- If 2nd column of... (3 Replies)
Hi,
I have a file of csv data, which looks like this:
file1:
1AA,LGV_PONCEY_LES_ATHEE,1,\N,1,00020460E1,0,\N,\N,\N,\N,2,00.22335321,0.00466628
2BB,LES_POUGES_ASF,\N,200,200,00006298G1,0,\N,\N,\N,\N,1,00.30887539,0.00050312... (10 Replies)
Discussion started by: djoseph
10 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)