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Top Forums UNIX for Beginners Questions & Answers How to align/sort the column pairs of an csv file, based on keyword word specified in another file? Post 303034622 by RudiC on Wednesday 1st of May 2019 06:03:50 AM
Old 05-01-2019
I don't think you get very far with sort. Try instead
Code:
awk -F"\t" '
NR==FNR {for (i=1; i<=3; i++)   {IX = (i-1)*3+1
                                 split ($IX, T, "_")
                                 O[T[1] FS i] = $IX FS FS $(IX+2)
                                }
         next
        }
        {for (i=1; i<=3; i++)  printf "%s%s", O[$1 FS i] (O[$1 FS i]?_:FS FS) , i==3?ORS:FS
        }
' file.csv file.key
xop_thy        80    xop_nmg        50    xop_nth        40
avr_irt        70    avr_njk        50    avr_ngt        50
str_tgt        80    str_nhj        60    str_nyu        60
cyv_gty        40                        
vir_plo        20    vir_thk        40    vir_tyk        80
cop_thy        70    cop_thl        40            
                     ijk_yuc        80    ijk_yuc        70
                                          irt_hgt        80

This User Gave Thanks to RudiC For This Post:
 

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JOIN(1) 						      General Commands Manual							   JOIN(1)

NAME
join - relational database operator SYNOPSIS
join [-an] [-e s] [-o list] [-tc] file1 file2 DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If file1 is `-', the standard input is used. File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in each line. There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con- sists of the common field, then the rest of the line from file1, then the rest of the line from file2. Fields are normally separated by blank, tab or newline. In this case, multiple separators count as one, and leading separators are dis- carded. These options are recognized: -an In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2. -e s Replace empty output fields by string s. -o list Each output line comprises the fields specified in list, each element of which has the form n.m, where n is a file number and m is a field number. -tc Use character c as a separator (tab character). Every appearance of c in a line is significant. SEE ALSO
sort(1), comm(1), awk(1). BUGS
With default field separation, the collating sequence is that of sort -b; with -t, the sequence is that of a plain sort. The conventions of join, sort, comm, uniq, look and awk(1) are wildly incongruous. 7th Edition April 29, 1985 JOIN(1)
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