IMAGEJ(1)																 IMAGEJ(1)

NAME

       imagej - A Java image processing program inspired by NIH Image.

SYNTAX

       imagej [option] <filename>
       imagej [-i image] [-b|-m] [arg1 ... argN]

DESCRIPTION

       Imagej  is a Java-based image processing program developed at the National Institutes of Health. ImageJ was designed with an open architec-
       ture that provides extensibility via Java plugins and recordable macros.  Custom acquisition, analysis and processing plugins can be devel-
       oped using ImageJ's built-in editor and a Java compiler.  User-written plugins make it possible to solve many image processing and analysis
       problems, from 3-dimensional live-cell imaging,
	to radiological image processing, multiple imaging system data comparisons to automated hematology systems.  ImageJ's plugin  architecture
       and built in development environment has made it a popular platform for teaching image processing.

       ImageJ can be run as an online applet, a downloadable application, or on any computer with a Java 1.1 or later virtual machine.

OPTIONS

       -h     Output help information and exit.

       -o     Open images in existing ImageJ panel if one exists.

       -p <N> Open images in existing ImageJ panel number <N>.

       -x <MB>
	      Set available memory.

       -c     Enable plugin compilation within imagej.

       -v     Be verbose (vv or vvv increases verbosity).

       -e Macro Code
	      Execute macro code.

       -r Menu Command
	      Run menu command.  Quotation marks are required around commands including spaces Commands can be sent to open ImageJ panels with the
	      -p option.

       -b macro
	      Run macro without graphics window.

       -m macro
	      Run macro, image will be opened before macro is run all following arguments are passed to macro.

FILES

       Most IMAGEJ add-on are taken from $HOME/.imagej.  The  system  wide
	equivalent is in /usr/share/imagej/

	HOME/.imagej/plugins/,
	      you can find and put new plugins here

	HOME/.imagej/macros/,
	      you can find and put new macros here

	HOME/.imagej/luts/,
	      you can find and put new look up tables here

EXAMPLES

       For compiling plugins:

       imagej -c

SEE ALSO

       The program is fully documented at http://imagej.nih.gov/ij/download/src/docs/

AUTHOR

       ImageJ was written by Wayne Rasband <wsr@nih.gov>

       This manual page, the wrapper and packaging was done by Paolo Ariano <paolo.ariano@unito.it>, for the Debian project.

Paolo Ariano							  March 14, 2008							 IMAGEJ(1)