Sponsored Content
Top Forums Shell Programming and Scripting awk to retain header lines in output Post 303031384 by Scrutinizer on Wednesday 27th of February 2019 01:01:39 PM
Old 02-27-2019
Hi, try:
Code:
  (V["AF"]+0 > .03) && 
  (V["DP"]+0 > 20) ||
  /^#/

or
Code:
awk -F'[\t;]' '
  /^#/ {
    print
    next
  }
  {
    split(x,V)
    for(i=1; i<=NF; i++) {
      split($i,F,/=/)
      V[F[1]]=F[2]
    }
  }
  (V["AF"]+0 > .03) && 
  (V["DP"]+0 > 20)
' file

This User Gave Thanks to Scrutinizer For This Post:
 

9 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

How to retain the header information of a file

Hi, I am using Bash shell to create some data and these data would be piped out to a file, let say output.txt. This output.txt I would like to add some extra header information such as comments, descriptions and general information on the text. I would like to know how could I maintain... (0 Replies)
Discussion started by: ahjiefreak
0 Replies

2. Shell Programming and Scripting

Need to extract some lines from output via AWK

Hello Friends, I have got, this output below and i want to extract the name of symlink which is highlighted in red and the path above it highlighted in blue. At the end i want to append path and symlink. /var/tmp/asirohi/jdk/jre /var/tmp/asirohi/jdk/jre/.systemPrefs... (3 Replies)
Discussion started by: asirohi
3 Replies

3. Shell Programming and Scripting

How to retain blank spaces in AWK?

Hi all, I have space delimated file which look like this 1 2 3 4 5 6 7 8 9 1 0 11 I am using simple awk command to read the second column awk '{print $2}' input_file but i got the output like this which also read 10 from the third column 2 6... (8 Replies)
Discussion started by: bsn2011
8 Replies

4. UNIX for Dummies Questions & Answers

cat to a file but retain header

Hi, Is there a way to write to a txt file each day but retain the header on the file? I'm cat'ing 5 files into one .txt file each day but I want the new data to be written after the first 2 lines which are: Progname Size Date Owner ---------------------------- Basically I want my new... (4 Replies)
Discussion started by: Grueben
4 Replies

5. Shell Programming and Scripting

AWK print and retain original format

I have a file with very specific column spacing formatting, I wish to do the following: awk '{print $1, $2, $3, $4, $5, $6, $19-$7, $20-$8, $21-$9, $10, $11, $12}' merge.pdb > vector.pdb but the format gets ruined. I have tried with print -f but to no avail.... (7 Replies)
Discussion started by: chrisjorg
7 Replies

6. Shell Programming and Scripting

Manipulate all rows except header, but header should be output as well

Hello There... I have a sample input file .. number:department:amount 125:Market:125.23 126:Hardware store:434.95 127:Video store:7.45 128:Book store:14.32 129:Gasolline:16.10 I will be doing some manipulations on all the records except the header, but the header should always be... (2 Replies)
Discussion started by: juzz4fun
2 Replies

7. Shell Programming and Scripting

awk to output lines less than number

I am trying to output all lines in a file where $7 is less than 30. The below code does create a result file, but with all lines in the original file. The original file is tab deliminated is that the problem? Thank you :). awk 'BEGIN{FS=OFS=","} $7 < 30 {print}' file.txt > result.txt... (3 Replies)
Discussion started by: cmccabe
3 Replies

8. Shell Programming and Scripting

Print header and lines that meet both conditions in awk

In the awk below I am trying to print only the header lines starting with # or ## and the lines that $7 is PASS and AF= is less than 5%. The awk does execute but returns an empty file and I am not sure what I am doing wrong. Thank you. file ... (0 Replies)
Discussion started by: cmccabe
0 Replies

9. Shell Programming and Scripting

Find header in a text file and prepend it to all lines until another header is found

I've been struggling with this one for quite a while and cannot seem to find a solution for this find/replace scenario. Perhaps I'm getting rusty. I have a file that contains a number of metrics (exactly 3 fields per line) from a few appliances that are collected in parallel. To identify the... (3 Replies)
Discussion started by: verdepollo
3 Replies
Locale::Codes::LangFam(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangFam(3pm)

NAME
Locale::Codes::LangFam - standard codes for language extension identification SYNOPSIS
use Locale::Codes::LangFam; $lext = code2langfam('apa'); # $lext gets 'Apache languages' $code = langfam2code('Apache languages'); # $code gets 'apa' @codes = all_langfam_codes(); @names = all_langfam_names(); DESCRIPTION
The "Locale::Codes::LangFam" module provides access to standard codes used for identifying language families, such as those as defined in ISO 639-5. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639-5 language family codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language families. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lext = code2langfam('apa','alpha'); $lext = code2langfam('apa',LOCALE_LANGFAM_ALPHA); The codesets currently supported are: alpha This is the set of three-letter (lowercase) codes from ISO 639-5 such as 'apa' for Apache languages. This is the default code set. ROUTINES
code2langfam ( CODE [,CODESET] ) langfam2code ( NAME [,CODESET] ) langfam_code2code ( CODE ,CODESET ,CODESET2 ) all_langfam_codes ( [CODESET] ) all_langfam_names ( [CODESET] ) Locale::Codes::LangFam::rename_langfam ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangFam::add_langfam ( CODE ,NAME [,CODESET] ) Locale::Codes::LangFam::delete_langfam ( CODE [,CODESET] ) Locale::Codes::LangFam::add_langfam_alias ( NAME ,NEW_NAME ) Locale::Codes::LangFam::delete_langfam_alias ( NAME ) Locale::Codes::LangFam::rename_langfam_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangFam::add_langfam_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangFam::delete_langfam_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.loc.gov/standards/iso639-5/id.php ISO 639-5 . AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.18.2 2013-11-04 Locale::Codes::LangFam(3pm)
All times are GMT -4. The time now is 12:02 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy