Hello, very new to this and have to use tcsh (not a choice at the moment).
I need to convert files within sub directories. My foreach loops don't work.
Directories are as follow:
and so on.
My script works only for the first sub-001 and does not move on to the second sub-002. It perfectly executes the operation on my .nii file. (3dcopy)
What am I doing wrong with the foreach that should go through all sub-*?
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Last edited by RavinderSingh13; 02-21-2019 at 12:41 AM..
Hi,
I have 2 files with contents in them and I need to compare each item in each file.
File1:
item4
item5
File2:
item2
item3
item5
item6
The items names can be of different lengths.
If the items in the File1 are not in File2,
delete the missing item in File1.
The resulting... (12 Replies)
Hello Guys,
Sometimes it is necessary to add more swap space after installation. For example, you may upgrade the amount of RAM in your system from 64 MB to 128 MB, but there is only 128 MB of swap space. It might be advantageous to increase the amount of swap space to 256 MB if you perform... (11 Replies)
OS=HP-UX ksh
The following works, except I want to include the <start> and <end> in the output.
awk -F '<start>' 'BEGIN{RS="<end>"; OFS="\n"; ORS=""} {print $2} somefile.log'
The following work in bash but not in ksh
sed -n '/^<start>/,/^<end>/{/LABEL$/!p}' somefile.log (4 Replies)
Hi,
I'm a complete newbie so bear with me.
I have a directory (and sub-dirs) full of .doc, .xls files.
What I'm trying to do is do a single search within the files (i.e. within each .doc etc) for occurrences of multiple items e.g. apples, pears, grapes, bananas.
Basically I'd provide a... (4 Replies)
Hi,
I've a list in the following format:
Empdept filedetails buildingNo Area
AAA 444 2 juy
AAA 544 2 kui
AAA 567 4 poi
AAA 734 5 oiu
AAA 444 ... (2 Replies)
Hi everyone.
I have a lot of programs i want to run on some data files, they need to be done sequentially. Often the output from one program is the input for the next.
e.g
$ progA data1 > data1.A
$ progB data1.A > data1.AB
$ progC data1.AB > data1.ABC
repeat on data2, 3, 4, 5, 6 etc
... (4 Replies)
Little lost here, I am trying to search a line for both values after the $ signs. My ultimate goal is to get percertage.
<?php
$string = "Something on sale for $4 and orginal price $10";
$strstr =. strstr($string, '$');
$strrchr =. strrchr($string, '$');
echo "$strstr<br>";
echo... (1 Reply)
Hi everyone! So I have a listView on my Form named "officeView" I already have the code to add and update info into it, but Im having troubles deleting items out of it. :/
Now I know how to delete an Item from the listView, but I want the item before the deleted item to become automatically... (0 Replies)
Hi,
Let's I have the following strings (md5):
07177edf8261d28c6a003e583fcbe38c
0717c0037b3a20fc0f0998e673f228d5
0717d611a5d24374628b98e17fd00977,0717d611a5d24374628b98e17fd00977
07189a18afdae558bb5aadfe602e4a91
0719e97d481c239667f38a3e166bed74
071af3225fe50a1fdbb42c43aac313cc... (4 Replies)
Hi there,
Here is my checklist of items,
4.1.1 Alerter
4.1.2 Client Services for Netware
4.1.3 Clipbook
4.1.4 Fax Service
4.1.5 File Replication
4.1.6 File Services for Macintosh
4.1.7 FTP Publishing Service
4.1.8 Help and Support
4.1.9 HTTP SSL
4.1.10 IIS Admin Service ... (1 Reply)
Discussion started by: alvinoo
1 Replies
LEARN ABOUT DEBIAN
warpimagemultitransform
WARPIMAGEMULTITRANSFORM(1) User Commands WARPIMAGEMULTITRANSFORM(1)NAME
WarpImageMultiTransform - part of ANTS registration suite
DESCRIPTION
Usage:
./WarpImageMultiTransform ImageDimension moving_image output_image -R reference_image --use-NN SeriesOfTransformations--(See Below)
SeriesOfTransformations --- ./WarpImageMultiTransform can apply, via concatenation, an unlimited number of transformations to your
data . Thus, SeriesOfTransformations may be an Affine transform followed by a warp another affine and then another warp.
Inverse affine transformations are invoked by calling
-i MyAffine.txt
InverseWarps are invoked by passing the InverseWarp.nii.gz
filename (see below for a note about this).
Example 1: Mapping a warped image into the reference_image domain by applying abcdWarpxvec.nii.gz/abcdWarpyvec.nii.gz/abcd-
Warpzvec.nii.gz and then abcdAffine.txt
./WarpImageMultiTransform 3 moving_image output_image -R reference_image abcdWarp.nii.gz abcdAffine.txt
Example 2: To map the fixed/reference_image warped into the moving_image domain by applying the inversion of abcdAffine.txt and then
abcdInverseWarpxvec.nii.gz/abcdInverseWarpyvec.nii.gz/abcdInverseWarpzvec.nii.gz .
./WarpImageMultiTransform 3 reference_image output_image -R moving_image -i abcdAffine.txt abcdInverseWarp.nii.gz
Note that the inverse maps (Ex. 2) are passed to this program in the reverse order of the forward maps (Ex. 1).
This makes sense, geometrically ... see ANTS.pdf for visualization of this syntax.
Compulsory arguments:
ImageDimension: 2 or 3 (for 2 or 3 Dimensional registration)
moving_image: the image to apply the transformation to
output_image: the resulting image
Optional arguments:
-R: reference_image space that you wish to warp INTO.
--tightest-bounding-box: Computes the tightest bounding box using all the affine transformations. It will be overrided by -R refer-
ence_image if given. --reslice-by-header: equivalient to -i -mh, or -fh -i -mh if used together with -R. It uses the orientation
matrix and origin encoded in the image file header. It can be used together with -R. This is typically not used together with any
other transforms.
--use-NN: Use Nearest Neighbor Interpolation.
--use-BSpline: Use 3rd order B-Spline Interpolation.
-i: will use the inversion of the following affine transform.
Other Example Usages: Reslice the image: WarpImageMultiTransform 3 Imov.nii.gz Iout.nii.gz --tightest-bounding-box
--reslice-by-header Reslice the image to a reference image: WarpImageMultiTransform 3 Imov.nii.gz Iout.nii.gz -R Iref.nii.gz
--tightest-bounding-box --reslice-by-header
Important Notes: Prefixname "abcd" without any extension will use ".nii.gz" by default The abcdWarp and abcdInverseWarp do not
exist. They are formed on the basis of abcd(Inverse)Warpxvec/yvec/zvec.nii.gz when calling ./WarpImageMultiTransform, yet you have
to use them as if they exist.
WarpImageMultiTransform 1.9 May 2012 WARPIMAGEMULTITRANSFORM(1)