I had a comment on the non-fitting file names similar to what you said but removed it when I tested the split installed on my linux (split (GNU coreutils) 8.28):
Had the requestor told us what system s/he has, a more specific answer had resulted.
hi, first congratulations on the nice forum!
Can anybody write script, which can make copy of some or all files of the current directory in new directory (called "backups", which must be made in the current directory, if it's not already exist). And bring out a massage (report) with the count... (7 Replies)
Hi,
root@server] df -h
121G 14G 101G 12% /home
147G 126G 14G 91% /backup
We having our site files and images are storing in
/backup/home/user/files/ through symbolic link created in /home directory pointing in /backup directory as following.
root@server] cd /home... (1 Reply)
I am very new to Linux/Unix. Kindly assist the following:
I wish to write a bash shell script called how_many_to_go that calculates and prints the number of days, hours, minutes and/or seconds until the end of the current month (based on the output of the date command).
Do ... (2 Replies)
I am newbie to UNIX. I came across this exercise in one the books.Can anyone help me with this question??????
Write a short Bash script that, given the name of a file as an argument,
reads the file name and creates a new file containing only lines which consist
of one word. Here is an example... (4 Replies)
Hi all,
This is my sample code in /etc/httpd/conf.d/applications.conf file currently we are creating subdomain mannually for every new subdomain. I want to automate this process througs bash script , how its possible.
<VirtualHost *:80>
ServerName google.com
ServerAlias google.com... (5 Replies)
Hi All,
I am unable to write the script for the below requirement.
Requirement:
Main table dir_ancillary table contain three column "dir_ancillary.table_name"," dir_ancillary.text_file_name ", "dir_ancillary.Include" .
This dir_ancillary contain undefined tables in the column... (2 Replies)
Hi Team
I am trying to put together a nice small script to mount my lvm snapshot
Here are my objectives
1 Check whether snapshot is currently mounted. If so echo umount snapshot and exit from the script.
2 If it's not mounting, check whether the mount point exist, If so, create lvm... (0 Replies)
Hello everyone.
I'm a Linux novice trying out a lot of bash scripting lately, as it is so very addictive.
Lately I have been setting up one of my boxes remotely and have been hardening it as much as possible. Please allow me to explain the scenario, as it does tend to become a little... (1 Reply)
#!/bin/bash -i
SAVEIFS=$IFS
IFS=$"\n\b"
picc=$*
if ; then
echo $TDATE
if ; then
touch dummy
touch -t "tdate" dummy
touch -r "dummy" "$picc"
else
echo -e "No mod date value to apply. If there is one in your shell,\ninvoke \eStarted asking advice on this (on Linuxquestions.org).... (9 Replies)
How would I write a value to a physical memory address?
I was able to read a physical memory address (for example, 0x400) using this line:
dd if=/dev/mem count=4 bs=1 skip=$(( 0x400 ))
But I get an error:
dd: 'standard input': cannot skip to specified offset
when I try to write using... (1 Reply)
Discussion started by: rabrandt
1 Replies
LEARN ABOUT DEBIAN
reprof
REPROF(1) User Commands REPROF(1)NAME
reprof - predict protein secondary structure and solvent accessibility
SYNOPSIS
reprof -i [query.blastPsiMat] [OPTIONS]
reprof -i [query.fasta] [OPTIONS]
reprof -i [query.blastPsiMat|query.fasta] --mutations [mutations.txt] [OPTIONS]
DESCRIPTION
Predict protein secondary structure and solvent accessibility.
Output Format
The output format is self-explanatory, i.e. the colums of the output are described in the output file itself.
OPTIONS -i, --input=FILE
Input BLAST PSSM matrix file (from Blast -Q option) or input (single) FASTA file.
-o, --out=FILE
Either an output file or a directory. If not provided or a directory, the suffix of the input filename (i.e. .fasta or .blastPsiMat) is
replaced to create an output filename.
--mutations=[all|FILE]
Either the keyword "all" to predict all possible mutations or a file containing mutations one per line such as "C12M" for C is mutated
to M on position 12:
C30Y
R31W
G48D
This mutation code is also attached to the output filename using "_". An additional file ending "_ORI" contains the prediction using
no evolutionary information even if a BLAST PSSM matrix was provided.
--modeldir=DIR
Directory where the model and feature files are stored. Default: /usr/share/reprof.
AUTHOR
Peter Hoenigschmid hoenigschmid@rostlab.org, Burkhard Rost
EXAMPLES
Prediction from BLAST PSSM matrix for best results:
reprof -i /usr/share/doc/reprof/examples/example.Q -o /tmp/example.Q.reprof
Prediction from FASTA file:
reprof -i /usr/share/doc/reprof/examples/example.fasta -o /tmp/example.fasta.reprof
Prediction from BLAST PSSM matrix file using the mutation mode:
reprof -i /usr/share/doc/reprof/examples/example.Q -o /tmp/mutations_example.Q.reprof --mutations /usr/share/doc/reprof/examples/mutations.txt
# Result files for the above call are going to be:
# /tmp/mutations_example.Q.{reprof,reprof_F172P,reprof_M1Q,reprof_N34Y,reprof_ORI} - see --mutations for a description of the extensions.
COPYRIGHT
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.
BUGS
https://rostlab.org/bugzilla3/enter_bug.cgi?product=reprof
SEE ALSO blast2(1)
http://rostlab.org/
1.0.1 2012-01-13 REPROF(1)