Hi there, I have a csv file with some columns comma sepated like this :
4502-17,PETER,ITA2,LEGUE,92,ME - HALF,23/05/10 15:00
4502-18,CARL,ITA2,LEGUE,96,ME - HALF,20/01/09 14:00
4502-19,OTTO,ITA2,LEGUE,97,ME - MARY,23/05/10 15:00
As you can see the column n. 7 is a timestamp column, I need... (23 Replies)
Hi Everyone,
a.txt
a b c 1 e e e e e
a b c 2 e e e e e
the output is
a b c 1 e e e e e
a 00b c 2 e e e e e
when 4th field = '2', then add '00' in the front of 2nd field value.
Thanks (9 Replies)
Dear All,
I would like to add values of a field, if the lines match in a certain field. Then I would like to divide the sum though the number of lines that have a matched field. This is the Input:
Input:
Test1 5
Test1 10
Test2 2
Test2 5
Test2 13
Test3 4
Output:
Test1 7.5
Test1 7.5... (6 Replies)
In file1 field $18 is removed.... column header is "Otherinfo", then each line in file1 is used to search file2 for a match. When a match is found the last four strings in file2 are copied to file1.
Maybe:
cut -f1-17 file1 and then match each line to file2
file1
Chr Start End ... (6 Replies)
The awk below does put in VUS in the 9th field but I can not seem to skip the header then add the VUS. I tried to incorporate NR >=2 and NR > 1 with no luck. Thank you :).
input
Chr Start End Ref Alt Func.refGene PopFreqMax CLINSIG Classification
chr1 43395635 ... (5 Replies)
I am trying to add a field header Inheritence in between $9 and $10 and default the value of each line to .. The below awk is close I think. Thanks :).
input
R_Index Chr Start End Ref Alt Func.IDP.refGene Gene.IDP.refGene ... (4 Replies)
Trying to use awk to add a . to $4. The input and output is tab-delimeted, but the awk seems to add a . in front of $5 and is space-delimeted. It seems close, but I am not able to produce the desired output. Thank you :).
file
chr1 948895 949015 chr1:948895-949015 ISG15
chr1 ... (1 Reply)
In the tab-delimited input below I am trying to use awk to -10 from $2 and +10 to $3. Something like
awk -F'\t' -v OFS='\t' -v s=10 '{split($4,a,":"); print $1,$2-s,$3+s,a,$5,$6} | awk {split(a,b,"-"); print $1,$2-s,$3+s,b-s,b+s,$5,$6}' input
should do that. I also need to -10 from $4... (2 Replies)
In the awk I am trying to add :p.=? to the end of each $9 that matches the pattern NM_. The below executes andis close but I can not seem to figure out why the :p.=? repeats in the split as in the green in the current output. I have added comments as well. Thank you :).
file
... (4 Replies)
The awk below produces the current output, which will add +1 to $3. However, I am trying to add the length of the matching characters between $5 and $6 to $3. I have tried using sub as a variable to store the length but am not able to do so correctly. I added comments to each line and the... (4 Replies)
Discussion started by: cmccabe
4 Replies
LEARN ABOUT MINIX
join
JOIN(1) General Commands Manual JOIN(1)NAME
join - relational database operator
SYNOPSIS
join [-an] [-e s] [-o list] [-tc] file1 file2
DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If file1 is `-', the standard
input is used.
File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in
each line.
There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con-
sists of the common field, then the rest of the line from file1, then the rest of the line from file2.
Fields are normally separated by blank, tab or newline. In this case, multiple separators count as one, and leading separators are dis-
carded.
These options are recognized:
-an In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2.
-e s Replace empty output fields by string s.
-o list
Each output line comprises the fields specified in list, each element of which has the form n.m, where n is a file number and m is a
field number.
-tc Use character c as a separator (tab character). Every appearance of c in a line is significant.
SEE ALSO sort(1), comm(1), awk(1).
BUGS
With default field separation, the collating sequence is that of sort -b; with -t, the sequence is that of a plain sort.
The conventions of join, sort, comm, uniq, look and awk(1) are wildly incongruous.
7th Edition April 29, 1985 JOIN(1)
02-13-2019
