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Top Forums Shell Programming and Scripting awk to add text to each line of matching id Post 303029011 by Don Cragun on Saturday 19th of January 2019 02:04:56 PM
Old 01-19-2019
Sorry... I missed one question concerning the line of code:
Code:
if(($2>min[array[5],array[1]] && $2<max[array[5],array[1]]) || ($3>max[array[5],array[1]] && $3<max[array[5],array[1]])){

Is it your intent to print the line containing exon if either endpoint is in an entry in the first input file for that $1,$4 pair, or should it only print the exon line if both endpoints are in range?
This User Gave Thanks to Don Cragun For This Post:
 

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ARRAY_REPLACE(3)							 1							  ARRAY_REPLACE(3)

array_replace - Replaces elements from passed arrays into the first array

SYNOPSIS
array array_replace (array $array1, array $array2, [array $...]) DESCRIPTION
array_replace(3) replaces the values of $array1 with values having the same keys in each of the following arrays. If a key from the first array exists in the second array, its value will be replaced by the value from the second array. If the key exists in the second array, and not the first, it will be created in the first array. If a key only exists in the first array, it will be left as is. If several arrays are passed for replacement, they will be processed in order, the later arrays overwriting the previous values. array_replace(3) is not recursive : it will replace values in the first array by whatever type is in the second array. PARAMETERS
o $array1 - The array in which elements are replaced. o $array2 - The array from which elements will be extracted. o $... - More arrays from which elements will be extracted. Values from later arrays overwrite the previous values. RETURN VALUES
Returns an array, or NULL if an error occurs. EXAMPLES
Example #1 array_replace(3) example <?php $base = array("orange", "banana", "apple", "raspberry"); $replacements = array(0 => "pineapple", 4 => "cherry"); $replacements2 = array(0 => "grape"); $basket = array_replace($base, $replacements, $replacements2); print_r($basket); ?> The above example will output: Array ( [0] => grape [1] => banana [2] => apple [3] => raspberry [4] => cherry ) SEE ALSO
array_replace_recursive(3), array_merge(3). PHP Documentation Group ARRAY_REPLACE(3)
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