I have been trying to execute the below command by changing directory and then copying contents of one directory to another by doing some file name manipulations in between. However this isnt working since as soon as the statement completes it goes back to the original folder. Can someone help in telling me how to change a directory in a script so I can execute subsequent steps within it using and modifying a variable through the steps.
This works fine from command line, however gives bad substitution error from the script because of the issue explained above
Code:
for file in /ABC/DEF/*.done; do file="${file%.*}"; file="${file##*.}"; cp "${file:0:31}"*.* /ABC/EDG/; done
Basically check for all files with name like CAT_TURNAROUND_201811120_075221_3.done in the folder ABC/DEF/*.done, then get all the files starting with just this part CAT_TURNAROUND_201811120_075221from this directory/ABC/DEF/ copied to /ABC/EDG/
Will really appreciate a solution. I have been trying to figure this out and checked various forums and tried alias, function etc. But it isn't working.
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Last edited by HikingLife; 01-05-2019 at 10:03 PM..
Reason: Correcting typos and fixing the sample file name
:confused:
Hi All,
This script is not working. I want to change the directory as per users selection in current shell. Looks like it is spawning sub-shell internally.
I have used
. changedir.sh
source changedir.sh
./changedire.sh
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I think this must be a very common job. "How could to Automatically change to Bash shell after login and then jail user can only using this shell".
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Place it in say:
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Hi,
I am trying to change the directory in my script, & want to check if the directory is present or not .
Ex:
cd /home/xyz/temp/logs
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HI,
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#!/bin/bash
echo -n "Enter number of sanger patients : "; read id
perl -ne 'chomp; system ("perl table_annovar.pl $_ humandb/ -buildver hg19 -protocol refGene,popfreq_all,common,clinvar,clinvarsubmit,clinvarreference -operation g,f,f,f,f,f -otherinfo")' < file.txt
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Discussion started by: cmccabe
7 Replies
LEARN ABOUT DEBIAN
tokens
TOKENS(1) AFS Command Reference TOKENS(1)NAME
tokens, tokens.krb - Displays the issuer's tokens
SYNOPSIS
tokens [-help]
tokens [-h]
tokens.krb [-help]
tokens.krb [-h]
DESCRIPTION
The tokens command displays all tokens (tickets) cached on the local machine for the issuer. AFS server processes require that their
clients present a token as evidence that they have authenticated in the server's local cell.
The (mostly obsolete) tokens.krb command is the same as tokens except that it also displays the user's Kerberos v4 ticket cache.
OPTIONS -help
Prints the online help for this command. All other valid options are ignored.
OUTPUT
The output lists one token for each cell in which the user is authenticated. The output indicates the
o User's AFS UID, if it is available for display.
o Server for which the token is valid (normally, afs). This includes a cell specification.
o Day and time the token expires.
The output of the Kerberos version of this command, tokens.krb, also reports the following about the Kerberos ticket-granting ticket: the
ticket owner, which Kerberos ticket-granting service that issued the ticket (for example, "krbtgt.ABC.COM"), and ticket's expiration date.
The string "--End of list--" appears at the end of the output. If the user is not authenticated in any cell, this line is all that appears.
EXAMPLES
The following example shows the output when the issuer is not authenticated in any cell.
% tokens
Tokens held by the Cache Manager:
--End of list--
The following example shows the output when the issuer is authenticated in ABC Corporation cell, where he or she has AFS UID 1000.
% tokens
Tokens held by the Cache Manager:
User's (AFS ID 1000) tokens for afs@abc.com [Expires Jan 2 10:00]
--End of list--
The following example shows the output when the issuer is authenticated in the ABC Corporation cell, the State University cell, and the XYZ
Company cell. The user has different AFS UIDs in the three cells. Tokens for last cell are expired:
% tokens
Tokens held by the Cache Manager:
User's (AFS ID 1000) tokens for afs@abc.com [Expires Jan 3 10:00]
User's (AFS ID 4286) tokens for afs@stateu.edu [Expires Jan 3 1:34]
User's (AFS ID 22) tokens for afs@xyz.com [>>Expired<]
--End of list--
The following example shows the output when the issuer uses the tokens.krb version of the command after authenticating in the ABC
Corporation cell using the klog.krb command.
% tokens.krb
Tokens held by the Cache Manager:
User's (AFS ID 1000) tokens for afs@abc.com [Expires Jan 31 00:09]
User smiths tokens for krbtgt.ABC.COM@abc.com [Expires Jan 31 00:09]
--End of list--
PRIVILEGE REQUIRED
None
SEE ALSO klog(1), unlog(1)COPYRIGHT
IBM Corporation 2000. <http://www.ibm.com/> All Rights Reserved.
This documentation is covered by the IBM Public License Version 1.0. It was converted from HTML to POD by software written by Chas
Williams and Russ Allbery, based on work by Alf Wachsmann and Elizabeth Cassell.
OpenAFS 2012-03-26 TOKENS(1)
01-05-2019
