Hello guys,
First of all happy holidays and happy new year.
I'm new in bioinformatic and also it is my first time that I write in this forum. Therefore, sorry if I make some mistakes.
I'm writing to ask your help to fix a problem:
I have a file like this:
I have to modify the file in order to have an output like this:
Could anyone help me to modify the file, please?
Thank you to all for your help in advance
Sal
Moderator's Comments:
edit by bakunin: Please use CODE-tags not only for code but also for data and terminal output. Thank you.
Hi i have a file which has values seperated by "," as shown below and I want to transpose for every doc_id in one row.
Input:
DOC_ID,KEYWORD
105,REGISTROS
105,GEOLOGIA
105,NUCLEOS
105,EXPEDIENTE
105,PROGRAMAS
10025,EXPEDIENTE
10025,LOCALIZACIONES
10025,OFICIOS
10025,PROGRAMAS... (4 Replies)
Hi All,
I have been trying to transpose rows to column in an large file (about 15000 lines) between matching pattern. Searched all posts in this forum, but not able find the solution to my problem. Any help appreciated.!!
Input
/*------XXXXXX-------*/
owner: XXXX
location: XXXX... (3 Replies)
Hi there,
Below is sample three rows which i need transpose into multiple rows.
By keeping first 2 fields static and split them into multiple rows depend following date field. Each into seperate rows.
Sample code:
... (6 Replies)
Hi Folks,
Iam a kinda newbie to unix shell scripting, the scenario is i have a text file containing the following info
Charlie chicago 15
Charlie newyork 26
jonny chicago 14
jonny newyork 15
joe chicago 15
joe newyork 18output should be
Name chicago ... (3 Replies)
Hi there,
I have a small csv file example below:
source,cu_001,cu_001_volume,cu_001_mass,cu_002,cu_002_volume,cu_002_mass,cu_003,cu_003_volume,cu_003_mass
ja116,1.33,3024000,9374400,1.54,3026200,9375123,1.98,3028000,9385512
I want to transpose columns to rows starting at the second... (3 Replies)
Hi All,
In shell, I have below data coming from some some text file as below:
. 351706 5861.8 0.026 0.012 12.584 0.026 0.012 12.582 0.000 0.000 0.000
Now i need the above data to be transposed as below
351706... (16 Replies)
I'm using the testawk.awk from the following thread
https://www.unix.com/shell-programming-and-scripting/18897-row-column-transpose.htmlI'm getting the following output
fieldname1 data1
fieldname2 data2
fieldname3 data3
How can I get like this instead
1 fieldname1 data1
2 fieldname2 data2... (1 Reply)
Gents,
Transpose from row to column, taking in consideration the first column, which contends the date.
Input file
72918,111000009,111000009,111000009,111000009,111000009,111000009,111000009,111000009,111000009
72918,2356,2357,2358,2359,2360,2361,2362,2363,2364
72918,0,0,0,0,0,0,0,0,0... (12 Replies)
Hi,
I have data in form of
A ram
B shyam
C seeta
D geeta
A bob
B methew
C Richad
D Mike
and i want it in this form.
A B C D
ram shyam seeta geeta
bob methew Richard Mike.
please help by providing the scripting for this. (3 Replies)
Discussion started by: ricbha
3 Replies
LEARN ABOUT REDHAT
cgi::pretty
CGI::Pretty(3pm) Perl Programmers Reference Guide CGI::Pretty(3pm)NAME
CGI::Pretty - module to produce nicely formatted HTML code
SYNOPSIS
use CGI::Pretty qw( :html3 );
# Print a table with a single data element
print table( TR( td( "foo" ) ) );
DESCRIPTION
CGI::Pretty is a module that derives from CGI. It's sole function is to allow users of CGI to output nicely formatted HTML code.
When using the CGI module, the following code:
print table( TR( td( "foo" ) ) );
produces the following output:
<TABLE><TR><TD>foo</TD></TR></TABLE>
If a user were to create a table consisting of many rows and many columns, the resultant HTML code would be quite difficult to read since
it has no carriage returns or indentation.
CGI::Pretty fixes this problem. What it does is add a carriage return and indentation to the HTML code so that one can easily read it.
print table( TR( td( "foo" ) ) );
now produces the following output:
<TABLE>
<TR>
<TD>
foo
</TD>
</TR>
</TABLE>
Tags that won't be formatted
The <A> and <PRE> tags are not formatted. If these tags were formatted, the user would see the extra indentation on the web browser caus-
ing the page to look different than what would be expected. If you wish to add more tags to the list of tags that are not to be touched,
push them onto the @AS_IS array:
push @CGI::Pretty::AS_IS,qw(CODE XMP);
Customizing the Indenting
If you wish to have your own personal style of indenting, you can change the $INDENT variable:
$CGI::Pretty::INDENT = " ";
would cause the indents to be two tabs.
Similarly, if you wish to have more space between lines, you may change the $LINEBREAK variable:
$CGI::Pretty::LINEBREAK = "
";
would create two carriage returns between lines.
If you decide you want to use the regular CGI indenting, you can easily do the following:
$CGI::Pretty::INDENT = $CGI::Pretty::LINEBREAK = "";
BUGS
This section intentionally left blank.
AUTHOR
Brian Paulsen <Brian@ThePaulsens.com>, with minor modifications by Lincoln Stein <lstein@cshl.org> for incorporation into the CGI.pm dis-
tribution.
Copyright 1999, Brian Paulsen. All rights reserved.
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
Bug reports and comments to Brian@ThePaulsens.com. You can also write to lstein@cshl.org, but this code looks pretty hairy to me and I'm
not sure I understand it!
SEE ALSO
CGI
perl v5.8.0 2002-06-01 CGI::Pretty(3pm)