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Full Discussion: awk incorrect format
Top Forums Shell Programming and Scripting awk incorrect format Post 303025262 by RudiC on Monday 29th of October 2018 06:12:57 PM
Old 10-29-2018
How about, hoping that any invisible surprises like the ones corona688 mentioned will have been taken care of, and untested, from a windows machine, so bear with me:


Code:
awk -F "\t" 'NR == FNR {REP[$3] = $4$5; next} REP[$1] == $4 {$3 = REP[$1]; gsub (/[^ACGT]/, "", $3); print}' OFS="\t" INPUT file2


BTW, if ($3 = $4) should read if ($3 == $4), but this would not explain the additional line feed that you complain about.
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shishi_ap_rep_verify_der(3)					      shishi					       shishi_ap_rep_verify_der(3)

NAME
shishi_ap_rep_verify_der - API function SYNOPSIS
#include <shishi.h> int shishi_ap_rep_verify_der(Shishi_ap * ap, char * der, size_t derlen); ARGUMENTS
Shishi_ap * ap structure that holds information about AP exchange char * der input array with DER encoded AP-REP. size_t derlen length of input array with DER encoded AP-REP. DESCRIPTION
DER decode AP-REP and set it in AP exchange using shishi_ap_rep_der_set() and verify it using shishi_ap_rep_verify(). RETURN VALUE
Returns SHISHI_OK, SHISHI_APREP_VERIFY_FAILED or an error. REPORTING BUGS
Report bugs to <bug-shishi@gnu.org>. COPYRIGHT
Copyright (C) 2002-2010 Simon Josefsson. Copying and distribution of this file, with or without modification, are permitted in any medium without royalty provided the copyright notice and this notice are preserved. SEE ALSO
The full documentation for shishi is maintained as a Texinfo manual. If the info and shishi programs are properly installed at your site, the command info shishi should give you access to the complete manual. shishi 1.0.1 shishi_ap_rep_verify_der(3)
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