After much experimenting with the -f feature I finally figured out how to trick it. It needs %.0f to make it print integers, followed by whatever string you want.
I suspect it's not really meant for that and might not work the same or reliably on other systems.
These 2 Users Gave Thanks to Corona688 For This Post:
I know the Sun Solaries versions are ( 2.3 , 2.4 , 2.5 ... 7 , 8 ) .
But some times I see sun os v5.x what does it mean ??
also what is the last new machine for sun and what are its details specifications .
Thanks (3 Replies)
Hello Again,
Ok guys. Thanks again for your help last time but I am in need of your experience again. I wrote this script:
#!/bin/sh
# List either files or directories in individual accounts
# using 1, 2 or 3 with invalid
case $1 in
echo select 1 to see the FILES in your... (3 Replies)
this is the simple question, please help me!
the question is: how to send exactly 50 ICMP Echo request packets with 500 bytes of payload to 202.139.129.221?
I tried to use ping -F 500 202.139.129.221, but it didn't work.
Thanks! (6 Replies)
I am trying to check through all of a certain type of file in all main directories, and find the top 10 that are taking up the most space. How can I do that? I was thinking like du *.file | sort -n | head (1 Reply)
Ive got some output in a file that looks exactly like this:
1
-----------
1542
1 record(s) selected.
How do I just extract that 1542 and drop it into another file or (preferrably) a variable (using a ksh script) (9 Replies)
I have a file name in this format
ABC_WIRE_TRANS_YYYYMMDD_00.DAT
I need to cut out the _00 out of the file name everytime. It could be _00, _01,_02, etc ....
How do I cut it out to look as follows?
ABC_WIRE_TRANS_YYYYMMDD.DAT (6 Replies)
Hi everybody:
Could anybody tell me if I have several files which each one it has this pattern name:
name1.dat name2.dat name3.dat name4.dat name10.dat name11.dat name30.dat
If I would like create one like:
name_total.dat
If I do:
paste name*.dat > name_total.dat (15 Replies)
I am having problems getting a list of filenames that I want from a directory.
example: I have 3 files - filename.xxx.20110505.123030
filename.yyy.20110505.123030
filename.zzz.20110505.123030
There may be multiple xxx,... (3 Replies)
This seems like an easy question, but I can't find an answer already posted.
I want a command to return all of the lines in a file containing exactly a string
I tried
grep -x "372701" x.txt
but this did not return anything
I am just trying to search a file for lines which contain... (4 Replies)
Discussion started by: jgrosecl
4 Replies
LEARN ABOUT DEBIAN
ace::sequence::featurelist
Ace::Sequence::FeatureList(3pm) User Contributed Perl Documentation Ace::Sequence::FeatureList(3pm)NAME
Ace::Sequence::FeatureList - Lightweight Access to Features
SYNOPSIS
# get a megabase from the middle of chromosome I
$seq = Ace::Sequence->new(-name => 'CHROMOSOME_I,
-db => $db,
-offset => 3_000_000,
-length => 1_000_000);
# find out what's there
$list = $seq->feature_list;
# Scalar context: count all the features
$feature_count = $list->types;
# Array context: list all the feature types
@feature_types = $list->types;
# Scalar context, 1 argument. Count this type
$gene_cnt = $list->types('Predicted_gene');
print "There are $gene_cnt genes here.
";
# Array context, 1 argument. Get list of subtypes
@subtypes = $list->types('Predicted_gene');
# Two arguments. Count type & subtype
$genefinder_cnt = $list->types('Predicted_gene','genefinder');
DESCRIPTION
Ace::Sequence::FeatureList is a small class that provides statistical information about sequence features. From it you can obtain summary
counts of the features and their types within a selected region.
OBJECT CREATION
You will not ordinarily create an Ace::Sequence::FeatureList object directly. Instead, objects will be created by calling a Ace::Sequence
object's feature_list() method. If you wish to create an Ace::Sequence::FeatureList object directly, please consult the source code for
the new() method.
OBJECT METHODS
There are only two methods in Ace::Sequence::FeatureList.
type()
This method has five distinct behaviors, depending on its context and the number of parameters. Usage should be intuitive
Context Arguments Behavior
------------------------
scalar -none- total count of features in list
array -none- list feature types (e.g. "exon")
scalar type count features of this type
array type list subtypes of this type
-any- type,subtype count features of this type & subtype
For example, this code fragment will count the number of exons present on the list:
$exon_count = $list->type('exon');
This code fragment will count the number of exons found by "genefinder":
$predicted_exon_count = $list->type('exon','genefinder');
This code fragment will print out all subtypes of "exon" and their counts:
for my $subtype ($list->type('exon')) {
print $subtype," ",$list->type('exon',$subtype),"
";
}
asString()
print $list->asString;
This dumps the list out in tab-delimited format. The order of columns is type, subtype, count.
SEE ALSO
Ace, Ace::Object, Ace::Sequence, Ace::Sequence::Feature, GFF
AUTHOR
Lincoln Stein <lstein@w3.org> with extensive help from Jean Thierry-Mieg <mieg@kaa.crbm.cnrs-mop.fr>
Copyright (c) 1999, Lincoln D. Stein
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.
perl v5.14.2 2000-06-11 Ace::Sequence::FeatureList(3pm)