I tried with turning file1 into a column file with:
and then solving it by working with columns
However, I then got an empty line as the output (instead of the wanted empty file) when both files contained the same numbers (as described in the end of my original post). I would like to solve it without modifying file1, but I don't know how to approach and start there.
Hello all,
I always found help for my problems using the search option, but this time my request is too specific. I have two files that I want to compare. File1 is the index and File2 contains the data:
File1:
chr1 protein_coding exon 500 600 . + . gene_id "20532";... (0 Replies)
Hi guys,
I'm rather new at using UNIX based systems, and when it comes to scripting etc I'm even newer.
I have two files which i need to compare.
file1: (some random ID's)
451245
451288
136588
784522
file2: (random ID's + e-mail assigned to ID)
123888 xc@xc.com
451245 ... (21 Replies)
I have two text files where the first three columns are exactly the same. I want to compare the fourth column of the text files and if the values are different, print that row into a new output file. How do I go about doing that?
File 1:
100 rs3794811 0.01 0.3434
100 rs8066551 0.01... (8 Replies)
Hi,
I have two text files with matching first columns. Some of the values in the second column do not match. I want to write a script to print out the rows (only the first column) where the values in the second column do not match.
Example:
Input 1
A 1
B 2
C 3
D 4
Input 2
A 2
B 2... (6 Replies)
Hi All,
I want to compare two files using shell script. One file will be input file and each line of input file will be compared against the other file.
for e.g.
File 1
10.3.242.170 saquatch Tesr.adc.unix.com jndi_p1 jndi_p1.unix.com
10.3.242.171 ness... (10 Replies)
I'm looking to match an error code against a list of possible codes and get the nearest match. The code would be a 6 character hexadecimal string.
I have a file of error codes all of which have a specific first 3 characters, however, after that the last 3 characters may be specific or generic as... (3 Replies)
Hi,
I have been trying to find help with my issue and I'm thinking awk may be able to do it.
I have two files eg
file1.txt
STRING1 230 400 0.36
STRING2 400 230 -0.13
STRING3 130 349 1
file2.txt
CUFFFLINKS 1 1394 93932 . + STRING1
CUFFFLINKS ... (9 Replies)
Hello all, First post here. I did not notice a previous post to help me down the right path. I am looking to compare a column in a CSV file against another file (which is not a column match one for one) but more or less when a match is made, I would like to append a third column that contains a... (17 Replies)
I have two file as given below which shows the ACL permissions of each file. I need to compare the source file with target file and list down the difference as specified below in required output. Can someone help me on this ?
Source File
*************
# file: /local/test_1
# owner: own
#... (4 Replies)
I have a file with contents as shown in file.texi
Would like to keep only the sections that have inlineifset till the empty line is reached. Finally replace the
following string with a space
@inlineifset{mrg, @opar{@bullet{}
I had written the following command but it messed my file
... (6 Replies)
Discussion started by: Danette
6 Replies
LEARN ABOUT NETBSD
join
JOIN(1) BSD General Commands Manual JOIN(1)NAME
join -- relational database operator
SYNOPSIS
join [-a file_number | -v file_number] [-e string] [-j file_number field] [-o list] [-t char] [-1 field] [-2 field] file1 file2
DESCRIPTION
The join utility performs an ``equality join'' on the specified files and writes the result to the standard output. The ``join field'' is
the field in each file by which the files are compared. The first field in each line is used by default. There is one line in the output
for each pair of lines in file1 and file2 which have identical join fields. Each output line consists of the join field, the remaining
fields from file1 and then the remaining fields from file2.
The default field separators are tab and space characters. In this case, multiple tabs and spaces count as a single field separator, and
leading tabs and spaces are ignored. The default output field separator is a single space character.
Many of the options use file and field numbers. Both file numbers and field numbers are 1 based, i.e. the first file on the command line is
file number 1 and the first field is field number 1. The following options are available:
-a file_number
In addition to the default output, produce a line for each unpairable line in file file_number. (The argument to -a must not be
preceded by a space; see the COMPATIBILITY section.)
-e string Replace empty output fields with string.
-o list The -o option specifies the fields that will be output from each file for each line with matching join fields. Each element of
list has the form 'file_number.field', where file_number is a file number and field is a field number. The elements of list must
be either comma (``,'') or whitespace separated. (The latter requires quoting to protect it from the shell, or, a simpler
approach is to use multiple -o options.)
-t char Use character char as a field delimiter for both input and output. Every occurrence of char in a line is significant.
-v file_number
Do not display the default output, but display a line for each unpairable line in file file_number. The options -v 1 and -v 2
may be specified at the same time.
-1 field Join on the field'th field of file 1.
-2 field Join on the field'th field of file 2.
When the default field delimiter characters are used, the files to be joined should be ordered in the collating sequence of sort(1), using
the -b option, on the fields on which they are to be joined, otherwise join may not report all field matches. When the field delimiter char-
acters are specified by the -t option, the collating sequence should be the same as sort(1) without the -b option.
If one of the arguments file1 or file2 is ``-'', the standard input is used.
The join utility exits 0 on success, and >0 if an error occurs.
COMPATIBILITY
For compatibility with historic versions of join, the following options are available:
-a In addition to the default output, produce a line for each unpairable line in both file 1 and file 2. (To distinguish between
this and -a file_number, join currently requires that the latter not include any white space.)
-j1 field Join on the field'th field of file 1.
-j2 field Join on the field'th field of file 2.
-j field Join on the field'th field of both file 1 and file 2.
-o list ...
Historical implementations of join permitted multiple arguments to the -o option. These arguments were of the form ``file_num-
ber.field_number'' as described for the current -o option. This has obvious difficulties in the presence of files named ``1.2''.
These options are available only so historic shell scripts don't require modification and should not be used.
SEE ALSO awk(1), comm(1), paste(1), sort(1), uniq(1)STANDARDS
The join command is expected to be IEEE Std 1003.2 (``POSIX.2'') compatible.
BSD April 28, 1995 BSD