I am getting an error "ftpNotes.sh: syntax error at line 8 : `<<' unmatched"
#!/bin/ksh
PATH=/usr/sbin/:/usr/bin:/usr/ucb:/etc:/usr/local/bin:.
cd $HOME
if ;then
if ; then
echo 'DSC file already ftp to epm server'
else
ftp -n epmdev00 <<SCRIPT... (1 Reply)
Started writing my code.
my read input is not even asking nor working?
And I get a EOF script error.
echo "1) aragorn.domain.net"
echo "2) marvel.domain.net"
echo "3) athena.domain.net"
echo "4) gandalf.domain.net"
echo "5) griffin.domain.net"
echo "What server would you like... (4 Replies)
Hello,
Please tell me if there is a better way to get the number of elements from an array that is passed to a function.
This is what works on Solaris 8 (ksh) but it looks odd:
loop_array() {
array_name=$2
b1='\${\#'
b2='}'
nr_elements=`eval echo... (6 Replies)
Please excuse my ineptitude for a bit as I've been spoiled for the past few months with only writing perl code instead of C.
So ok, I've been thinking about some code to change the crc32 values that are held within central directory headers of zip files.
Because I'm lazy I decided to just... (3 Replies)
Hi All,
Could some one help me to reduce the code...
if
then
./plist -m "$queuename" |grep $2|awk '{print $3}' >unlock.log
elif
then
./plist -m "$queuename" |grep $2|awk '{print $4}' >unlock.log
else
./plist -m "$queuename" |grep $2|awk '{print $5}' >unlock.log
.
.
.
.
... (1 Reply)
Let me know if there is a way to pass array to a funtion in ksh script.
function isPresent
{
typeset member
member=$1
dbList=$2
echo '$1:' $1
echo '$2' $dbList
The array will be at the second position....something like this
isPresent 12 <array>
if
then
echo... (3 Replies)
I have a question on how can I assign a output of a function to a variable which is executed in background.
Here is my example
$ cat sample_program.sh
#!/bin/ksh
exec_func () {
sleep 1
v=`expr $1 + 100`
print $v
}
export OUT_ARR
date
for i in 1 2
do
OUT_ARR=`exec_func $i` &... (1 Reply)
I have the following code to count the number of how many times the name occurred in one file. The code is working fine and the output is exactly what I want. The problem is the real code has more than 50 names in function listname which cause function name to have more than 50 case ,and function... (14 Replies)
Discussion started by: samsan
14 Replies
LEARN ABOUT DEBIAN
go::metadata::panther
GO::Metadata::Panther(3pm) User Contributed Perl Documentation GO::Metadata::Panther(3pm)NAME
GO::Metadata::Panther - Species info for data used by Panther Clusters
SYNOPSIS
use GO::Metadata::Panther qw/@species/;
for my $species (@species) {
# do something
}
Or
use GO::Metadata::Panther;
my $s = GO::Metadata::Panther->code('YEAST');
DESCRIPTION
Accesses information related to species in the Panther seq2pthr.gz file. This file can be fetched from:
<ftp://ftp.pantherdb.org/genome/pthr7.0/>
Each item in the exportable @species array contains a hash reference for each species. The items in that hash are:
code
A scalar or the UniProt species code.
ncbi_taxa_id
A scalar reference of NCBI taxa ids that items in the GO database match. This should only be one id, but sometimes it's useful to scan
multiple.
For a complete list of every UniProt species matched to a NCBI taxa <http://www.uniprot.org/docs/speclist>
Constructors
The constructors scans @species for the requested data and returns the object that matches the data. Otherwise it returns a false false.
my $s = GO::Metadata::Panther->code(unicode_species_code)
Return an object filled with the species reference from the UniProtKB species code.
my $s = GO::Metadata::Panther->ncbi(ncbi_taxa_id)
Greate an object from the ncbi_taxa_id.
Function
Functions that can be used outside of the OO interface.
GO::Metadata::Panther::codes()
Returns a list of all UniProt species codes in @species.
GO::Metadata::Panther::valid_codes(unicode_species_code)
Send it a list of panther Unicode codes, returns true if they are all present in @species. Othewise returns false.
OO Function
$s->ncbi_ids()
Returns the list of NCBI taxa identifiers associated with the UniProt species code. In a perfect word this will only every return one
value. In any case, the first value will be the actual numeric identifier associated.
AUTHOR
Sven Heinicke <sven@genomics.princeton.edu</gt>
perl v5.14.2 2010-07-08 GO::Metadata::Panther(3pm)