Sponsored Content
Top Forums Shell Programming and Scripting Qsub + job array + while read; do; done Post 303014281 by echo manolis on Thursday 8th of March 2018 12:19:07 PM
Old 03-08-2018
Qsub + job array + while read; do; done

Code:
Linux Server

Hi!

just some help...

I'm using a "Sun Grid Engine" with "qsub"

In one hand I have this code

Code:
while read -r H; do echo ${H}; done < list

The number of the lines in the list file is 100.

On the other hand I want to create a job array with the option -t

Code:
echo "echo $H" | qsub -N loop -t 1-100


How can I merge the two codes? In the way to create a job array (1-100) where each job read a line from the list file...?



Many thanks
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

read input file for batch job

hi all, I am a newbie in unix shell script. May I know how to write a bacth job to read a list of files afrom the inout file and do the chmod ? Thanks. i.e. inside input.txt ==== a.txt b.txt c.txt and I want to write a batch job to read the input .txt and do the chmod 755 for all 3... (14 Replies)
Discussion started by: kinmak
14 Replies

2. Shell Programming and Scripting

how to read a var value into array

Hi I need to read a value of the variable into array so each character/digit will become an array element,for example: A=147921231432545436547568678679870 The resulting array should hold each digit as an element. Thanks a lot for any help -A (7 Replies)
Discussion started by: aoussenko
7 Replies

3. Shell Programming and Scripting

Read array from a file

Hi I've a config file like: file1 #comment k_array: 1 2 3 4 5 n_array: 7 8 9 0 11 I'd like to write a script that read it and store k_array and n_array in 2 arrays. I mean the script should be able to use both as array. I've tried to use awk as (only for one array): ... (5 Replies)
Discussion started by: Dedalus
5 Replies

4. Shell Programming and Scripting

cron job issue..i hav read the basic threads already...

hi friends well m facing a different sort of issue in my cron. i hav set job like this 30 09 * * 1 /bin/backup14M 01 14 * * 1 /bin/backup14N 20 18 * * 1 /bin/backup14E that is for every Monday at three different times. but, first job executes well, later ones do not. I checked my... (13 Replies)
Discussion started by: oracle.test2
13 Replies

5. Shell Programming and Scripting

qsub

Hey all, I have a binary file, named "exe1" that receives a parameter. (I don't have its source code). Executing "exe1" results in creating 3 output files. I have a bash script that runs "exe1". I want to enter "exe1" to cluster queue (using subq command) But i want to do it more than... (1 Reply)
Discussion started by: elad2109
1 Replies

6. UNIX for Advanced & Expert Users

How to set the SGE job execution order for nested qsub?

Dear All I am trying to write a script to set the SGE job execution order. I named each job with 'job1', 'job2' and 'job3'. I want my script to do: When 'job1' execution is complete, 'job2' is executed; when both 'job1' and 'job2' are complete, 'job3' is executed. First, I tried this... (0 Replies)
Discussion started by: cliffyiu
0 Replies

7. UNIX for Dummies Questions & Answers

Qsub and printf

Hello, I have some issue with qsub and the standard output : I launch a script that "echoes" the string "abc" and then executes a C program in which I print informations with the printf function ; the .o file contains "abc" but not the information displayed by printf. I also tried... (0 Replies)
Discussion started by: Shaderw
0 Replies

8. UNIX for Advanced & Expert Users

Collecting job id from qsub command

Hello. Hopefully this is the right forum, did a search and found some similar questions here. I'm trying to find out if there is a way to get the job id while submitting a job using qsub. I want to monitor the list of active jobs using qstat and when my jobid is no longer on the active list, I... (3 Replies)
Discussion started by: aeoleon88
3 Replies

9. Shell Programming and Scripting

PERL : Read an array and write to another array with intial string pattern checks

I have an array and two variables as below, I need to check if $datevar is present in $filename. If so, i need to replace $filename with the values in the array. I need the output inside an ARRAY How can this be done. Any help will be appreciated. Thanks in advance. (2 Replies)
Discussion started by: irudayaraj
2 Replies

10. Programming

C++ how would you read this file into an array.

here is the pesudo file. REREREEEEEERRRREER SOMEStrinG1234 RERRRR EEERRRREER SOMEStrinG1224 REREREEEREERRR REE SOMEStrinG1214 REREREREREREREEEER SOMEStrinG1204 RERE EEEEEERRRRRRR SOMEStrinG1294 REREEREEE ERRRREER SOMEStrinG1284 REREREEEEEERR REER here is my attempted code #include... (3 Replies)
Discussion started by: briandanielz
3 Replies
Locale::Codes::LangExt(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangExt(3pm)

NAME
Locale::Codes::LangExt - standard codes for language extension identification SYNOPSIS
use Locale::Codes::LangExt; $lext = code2langext('acm'); # $lext gets 'Mesopotamian Arabic' $code = langext2code('Mesopotamian Arabic'); # $code gets 'acm' @codes = all_langext_codes(); @names = all_langext_names(); DESCRIPTION
The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in the IANA language registry. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language registry codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lext = code2langext('acm','alpha'); $lext = code2langext('acm',LOCALE_LANGEXT_ALPHA); The codesets currently supported are: alpha This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic. This is the default code set. ROUTINES
code2langext ( CODE [,CODESET] ) langext2code ( NAME [,CODESET] ) langext_code2code ( CODE ,CODESET ,CODESET2 ) all_langext_codes ( [CODESET] ) all_langext_names ( [CODESET] ) Locale::Codes::LangExt::rename_langext ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangExt::add_langext ( CODE ,NAME [,CODESET] ) Locale::Codes::LangExt::delete_langext ( CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_alias ( NAME ,NEW_NAME ) Locale::Codes::LangExt::delete_langext_alias ( NAME ) Locale::Codes::LangExt::rename_langext_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::delete_langext_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.iana.org/assignments/language-subtag-registry The IANA language subtag registry. AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2012 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.16.2 2012-10-11 Locale::Codes::LangExt(3pm)
All times are GMT -4. The time now is 12:46 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy