each input file is a tsv of 40 columns, the below is an example of multiple lines (I only show 4 columns, as all 40 are the same or close to it and the script does produce the desired output). The problem I am having is that if there and Additional CNV detected as in output 1, then the script works printing Additional CNV detected followed by the line or lines.
If there are No Additional CNV detected as in output 2, that line prints multiple times (presumably 2800 because that is the total lines).
I am using ubuntu 14.04 as my OS.
Post 1 is actual output produces with the complete files, but to keep the post easier to read I only used several lines.
The output is close as is, I just cant seem to solve why No Additional CNV detected repeats. Thank you very much .
file
Code:
chr1:11184539 CNV 5%:5.5,95%:2.68 Name
chr1:11184539 REF
chr1:11184539 SNV A
chr1:11184555 CNV 5%:0.9,95%:1.9 BRCA1
chr1:11184539 FUSION
chr1:11184539 INDEL G
chr1:11184555 CNV 5%:2.5,95%:2.68 Name2
chr1:11184555 CNV 5%:1.1,95%:1.8 BRCA2
Can someone help me with the following 2 objectives?
1) The following command is just an example. It gets a list of all print jobs. From there I am trying to extract the printer name. It works with the following command:
lpstat -W "completed" -o | awk -F- '{ print $1}'
Problem is, I want... (6 Replies)
I need to add the content of file1 to file2 - all lines but not those existing in file2 already, so the "cat file1 >> file2" doesn't work.
For example,
file1:
100 xxxxxx str1
102 xxxxxx str2
File2:
50 xxxxxxx xxx
30 xxxxxxxxxxx
102 xxxxxx str2 xxxx
......
the result:
50 xxxxxxx... (9 Replies)
Hello,
I have file to work with. It has 5 columns. The first three, altogether, constitutes the position. The 4th column contains some values for downstream analysis and the fifth column contains some values that I want to add to 4th column (only if they happen to be in the same position).
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Hello everyone...
I need to find out, how to find longest line or possibly lines in several files which are arguments for script. The thing is, that I tried some possibilities before, but nothing worked correctly.
Example
when i use:
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I know uniq exists, but am not sure how to remove repeating lines when they are groups of two different lines repeating themselves, without using sort. I need them to be sorted in the original order, just to remove repeats.
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Hey Guys!
I have written a code which combines lots of files into one big file(.csv).
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Hi,
I need to find the lines which are repeating in a file
cat file1
abcdef 23-1
abcdef 24-1
bcdeff 25-0
ttdcfg 26-0
ttdcfg 20-0
bcdef1 25-0
bcdef2 25-0
bcdef3 25-0
bcdef4 25-0
bcdef4 00-0any help is greatly appreciated. Thanks in advance.
In need to find which one are... (3 Replies)
Hi,
I'm having trouble in achieving the following scenario. There is a txt file with thousands of lines and few lines are repeated, which needs to be removed using a script.
File.txt
20140522121432,0,12,ram
Loc=India
From=ram@xxx.com, To=ravi@yyy.com,,
1
2
3
4
.
.
30... (18 Replies)
I am trying to make my script as simple as a possible but, I am not sure if the way I am approaching is necessarily the most efficient or effective it can be. What I am mainly trying to fix is a for loop to remove a string from the specified files and within this loop I am trying to copy the lines... (2 Replies)
Discussion started by: Allie_gastrator
2 Replies
LEARN ABOUT SUSE
irsend
IRSEND(1) FSF IRSEND(1)NAME
irsend - basic LIRC program to send infra-red commands
SYNOPSIS
irsend [options] DIRECTIVE REMOTE CODE [CODE...]
DESCRIPTION
Asks the lircd daemon to send one or more CIR (Consumer Infra-Red) commands. This is intended for remote control of electronic devices such
as TV boxes, HiFi sets, etc.
DIRECTIVE can be:
SEND_ONCE - send CODE [CODE ...] once
SEND_START - start repeating CODE
SEND_STOP - stop repeating CODE
LIST - list configured remote items
SET_TRANSMITTERS - set transmitters NUM [NUM ...]
SIMULATE - simulate IR event
REMOTE is the name of a remote, as described in the lircd configuration file.
CODE is the name of a remote control key of REMOTE, as it appears in the lircd configuration file.
NUM is the transmitter number of the hardware device.
For the LIST DIRECTIVE, REMOTE and/or CODE can be empty:
LIST "" "" - list all configured remote names
LIST REMOTE "" - list all codes of REMOTE
LIST REMOTE CODE - list only CODE of REMOTE
The SIMULATE command only works if it has been explicitly enabled in lircd.
-h --help
display usage summary
-v --version
display version
-d --device
use given lircd socket [/var/run/lirc/lircd]
-a --address=host[:port]
connect to lircd at this address
-# --count=n
send command n times
EXAMPLES
irsend LIST DenonTuner ""
irsend SEND_ONCE DenonTuner PROG-SCAN
irsend SEND_ONCE OnkyoAmpli VOL-UP VOL-UP VOL-UP VOL-UP
irsend SEND_START OnkyoAmpli VOL-DOWN ; sleep 3
irsend SEND_STOP OnkyoAmpli VOL-DOWN
irsend SET_TRANSMITTERS 1
irsend SET_TRANSMITTERS 1 3 4
irsend SIMULATE "0000000000000476 00 OK TECHNISAT_ST3004S"
FILES
/etc/lirc/lircd.conf
Default lircd configuration file. It should contain all the remotes, their infra-red codes and the corresponding timing and wave-
form details.
DIAGNOSTICS
If lircd is not running (or /var/run/lirc/lircd lacks write permissions) irsend aborts with the following diagnostics:
"irsend: could not connect to socket"
"irsend: Connection refused" (or "Permission denied").
SEE ALSO
The documentation for lirc is maintained as html pages. They are located under html/ in the documentation directory.
lircd(8), mode2(1), smode2(1), xmode2(1), irrecord(1), irw(1), http://www.lirc.org.
irsend 0.8.7pre1 May 2010 IRSEND(1)
01-09-2018
.