The bash below executes and seems to work fine on those files in which . However on those files where there is no additional CNV detected that line repeats multiple times
instead of only once. I tried adding an END as all lines are printed but that doesn't help. I can not seem to solve this without encountering new issues. Thank you .
file with CNV detected (correct)
No additional CNV detected repeats
Last edited by cmccabe; 01-09-2018 at 03:20 PM..
Reason: fixed format
Can someone help me with the following 2 objectives?
1) The following command is just an example. It gets a list of all print jobs. From there I am trying to extract the printer name. It works with the following command:
lpstat -W "completed" -o | awk -F- '{ print $1}'
Problem is, I want... (6 Replies)
I need to add the content of file1 to file2 - all lines but not those existing in file2 already, so the "cat file1 >> file2" doesn't work.
For example,
file1:
100 xxxxxx str1
102 xxxxxx str2
File2:
50 xxxxxxx xxx
30 xxxxxxxxxxx
102 xxxxxx str2 xxxx
......
the result:
50 xxxxxxx... (9 Replies)
Hello,
I have file to work with. It has 5 columns. The first three, altogether, constitutes the position. The 4th column contains some values for downstream analysis and the fifth column contains some values that I want to add to 4th column (only if they happen to be in the same position).
My... (5 Replies)
Hello everyone...
I need to find out, how to find longest line or possibly lines in several files which are arguments for script. The thing is, that I tried some possibilities before, but nothing worked correctly.
Example
when i use:
awk ' { if ( length > L ) { L=length ;s=$0 } }END{ print... (23 Replies)
I know uniq exists, but am not sure how to remove repeating lines when they are groups of two different lines repeating themselves, without using sort. I need them to be sorted in the original order, just to remove repeats.
cd /media/AUDIO/WAVE/9780743518673/mp3
~/Desktop/mp3-to-m4b... (1 Reply)
Hey Guys!
I have written a code which combines lots of files into one big file(.csv).
However, each of the original files had headers on the first line, and now that I've combined the files the headers are interspersed throughout the new combined data frame. For example, throughout the data... (21 Replies)
Hi,
I need to find the lines which are repeating in a file
cat file1
abcdef 23-1
abcdef 24-1
bcdeff 25-0
ttdcfg 26-0
ttdcfg 20-0
bcdef1 25-0
bcdef2 25-0
bcdef3 25-0
bcdef4 25-0
bcdef4 00-0any help is greatly appreciated. Thanks in advance.
In need to find which one are... (3 Replies)
Hi,
I'm having trouble in achieving the following scenario. There is a txt file with thousands of lines and few lines are repeated, which needs to be removed using a script.
File.txt
20140522121432,0,12,ram
Loc=India
From=ram@xxx.com, To=ravi@yyy.com,,
1
2
3
4
.
.
30... (18 Replies)
I am trying to make my script as simple as a possible but, I am not sure if the way I am approaching is necessarily the most efficient or effective it can be. What I am mainly trying to fix is a for loop to remove a string from the specified files and within this loop I am trying to copy the lines... (2 Replies)