09-22-2017
if(index$f["FuncrefGene"]
This is
$7 or
Func.refGene in the
tab-delimited input.txt. Thank you
.
I will make the change in the variables, I didn't even catch that. Thank you
.
Last edited by cmccabe; 09-22-2017 at 09:39 AM..
Reason: added details
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hello Friends,
I have a file(InputFile.csv) with the following columns(the columns are pipe-delimited):
ColA|ColB|ColC|ColD|ColE|ColF
Now for this file, I have to get those records which fulfil the following condition:
If "ColB" is NOT NULL and "ColD" has values one of the following... (9 Replies)
Discussion started by: mehimadri
9 Replies
2. Shell Programming and Scripting
With this script i want to print the output to a specific field-number . Can anybody help?
awk 'NR=FNR{split(FILENAME,fn,"_");nr=$2;f = $1} END{for (i=1;i<=f;i++) print i,$fn=nr}' input_5.csv input_6.csvinput_5.csv
4 135
5 185
6 85
11 30input_6.csv
1 90
3 58
4 135
7 60
8 55
10... (1 Reply)
Discussion started by: sdf
1 Replies
3. Shell Programming and Scripting
Hello,
I'm trying the solve the following problem.
I have a file which I intend to use as a csv called master.csv
The columns are separated by commas.
I want to change the text on a specific row in either column 3,4,5 or 6 from xxx to yyy depending upon if column 1 matches a specified pattern.... (3 Replies)
Discussion started by: cyphex
3 Replies
4. Shell Programming and Scripting
Please help me to write a script
Match with ACNO & NAME if it matched calculate the total val1 val2 val3 and val4 and GT is total of ACNO wise.please check the output
Table
-----------------
1005|ANDP|ACN|20|50|10|30
1005|ANDP|ACN|20|10|30|40
1001|AND|NAC|40|50|40|50... (22 Replies)
Discussion started by: kalia4u
22 Replies
5. Shell Programming and Scripting
If $1 in file1 matches $2 in file2. Then the value in $2 of file2 is updated to $1"."$2 of file2. The awk seems to only match the two files but not update. Thank you :).
awk
awk 'NR==FNR{A ; next} $1 in A { $2 = a }1' file1 file2
file1
name version
NM_000593 5
NM_001257406... (3 Replies)
Discussion started by: cmccabe
3 Replies
6. Shell Programming and Scripting
I am trying to use awk to match two files that are tab-delimited. When a match is found between file1 $1 and file2 $4, $4 in file2 is updated using the $2 value in file1. If no match is found then the next line is processed. Thank you :).
file1
uc001bwr.3 ADC
uc001bws.3 ADC... (4 Replies)
Discussion started by: cmccabe
4 Replies
7. Shell Programming and Scripting
In the tab-delimeted input file below I am trying to use awk to update the value in $2 if TYPE=ins in bold, by adding the value of
HRUN= in italics. In the below since in line 1 TYPE=ins the 117282541 value in $2 has 6 added because that is the value of HRUN=.
Hopefully the awk is a start but I... (2 Replies)
Discussion started by: cmccabe
2 Replies
8. Shell Programming and Scripting
I am trying to use awk to update the below tab-delimited file based on 5 different rules/conditions. The final output is also
tab-delimited and each line in the file will meet one of the conditions. My attemp is below as well though I am not very confident in it. Thank you :).
Condition 1: The... (10 Replies)
Discussion started by: cmccabe
10 Replies
9. Shell Programming and Scripting
In the perl below, which does execute, I am having trouble with the else in Rule 3. The digit in f{8} is extracted and used to update f accordinly along with the value in f.
There can be either - * or + before the number that is extracted but the same logic applies, that is if the value is greater... (5 Replies)
Discussion started by: cmccabe
5 Replies
10. Shell Programming and Scripting
I have an input file with
A=xyz
B=pqr
I would want the value in Second Field (xyz or pqr) updated with a value present in Shell Variable based on the value passed in the first field. (A or B )
while read line
do
NEW_VALUE = `some functionality done on $line`
If $line=First Field-... (1 Reply)
Discussion started by: infernalhell
1 Replies
LEARN ABOUT REDHAT
mac2unix
dos2unix(1) General Commands Manual dos2unix(1)
NAME
dos2unix - DOS/MAC to UNIX text file format converter
SYNOPSYS
dos2unix [options] [-c convmode] [-o file ...] [-n infile outfile ...]
Options:
[-hkqV] [--help] [--keepdate] [--quiet] [--version]
DESCRIPTION
This manual page documents dos2unix, the program that converts plain text files in DOS/MAC format to UNIX format.
OPTIONS
The following options are available:
-h --help
Print online help.
-k --keepdate
Keep the date stamp of output file same as input file.
-q --quiet
Quiet mode. Suppress all warning and messages.
-V --version
Prints version information.
-c --convmode convmode
Sets conversion mode. Simulates dos2unix under SunOS.
-o --oldfile file ...
Old file mode. Convert the file and write output to it. The program default to run in this mode. Wildcard names may be used.
-n --newfile infile outfile ...
New file mode. Convert the infile and write output to outfile. File names must be given in pairs and wildcard names should NOT be
used or you WILL lost your files.
EXAMPLES
Get input from stdin and write output to stdout.
dos2unix
Convert and replace a.txt. Convert and replace b.txt.
dos2unix a.txt b.txt
dos2unix -o a.txt b.txt
Convert and replace a.txt in ASCII conversion mode. Convert and replace b.txt in ISO conversion mode. Convert c.txt from Mac to Unix
ascii format.
dos2unix a.txt -c iso b.txt
dos2unix -c ascii a.txt -c iso b.txt
dos2unix -c mac a.txt b.txt
Convert and replace a.txt while keeping original date stamp.
dos2unix -k a.txt
dos2unix -k -o a.txt
Convert a.txt and write to e.txt.
dos2unix -n a.txt e.txt
Convert a.txt and write to e.txt, keep date stamp of e.txt same as a.txt.
dos2unix -k -n a.txt e.txt
Convert and replace a.txt. Convert b.txt and write to e.txt.
dos2unix a.txt -n b.txt e.txt
dos2unix -o a.txt -n b.txt e.txt
Convert c.txt and write to e.txt. Convert and replace a.txt. Convert and replace b.txt. Convert d.txt and write to f.txt.
dos2unix -n c.txt e.txt -o a.txt b.txt -n d.txt f.txt
DIAGNOSTICS
BUGS
The program does not work properly under MSDOS in stdio processing mode. If you know why is that so, please tell me.
AUTHORS
Benjamin Lin - <blin@socs.uts.edu.au>
Bernd Johannes Wuebben (mac2unix mode) <wuebben@kde.org>
MISCELLANY
Tested environment:
Linux 1.2.0 with GNU C 2.5.8
SunOS 4.1.3 with GNU C 2.6.3
MS-DOS 6.20 with Borland C++ 4.02
Suggestions and bug reports are welcome.
SEE ALSO
unix2dos(1) mac2unix(1)
1995.03.31 dos2unix v3.0 dos2unix(1)