I think the below will capture lines 2-6, but not line 1 (looks like 018328) is being captured by the regex. Is the syntax correct or is there a better way? Thank you .
perl
Code:
if ($FuncrefGene !~ /exonic/i && $GeneDetailrefGene=~/\D(\d+)/) { # capture the digits into $1
if ($1 > 11) { #
$1 ||= 0; # Give it a value of zero if no numeric value was found.
$classification = 'Likely Benign'; # Reclassify intronic variants (with distance only) based on distance to exon > 10 to Likely Benign
}
}
else {
if ($FuncrefGene !~ /exonic/i && $GeneDetailrefGene=~/(\D\d+)/) { # capture the digits after any non-digit into $1
if ($1 > 11) { #
$1 ||= 0; # Give it a value of zero if no numeric value was found.
$classification = 'Likely Benign'; # Reclassify intronic variants (with distance only) based on distance to exon > 10 to Likely Benign
}
}
else {
if ($FuncrefGene !~ /exonic/i) {
my ($transcript) = ($GeneDetailrefGene) =~ /(?:\.\d+[+*-])/; # Get a numeric value if exists using (.) and (+/-) and capture digits into $transcript.
$transcript ||= 0; # Give it a value of zero if no numeric value was found.
$classification = 'Likely Benign' if $transcript > 11; # Reclassify intronic variants (following c. nomenclature) to Likely Benign if distance greater than 10
}
}
i am using perl in win2000advanced server...
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perl -version:
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This is perl, v5.6.1 built for MSWin32-x86-multi-thread
(with 1 registered patch, see perl -V for more detail)
Copyright 1987-2001, Larry Wall
Binary build 638 provided by... (1 Reply)
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Some time ago I encrypted the harddrive of my notebook.
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... (1 Reply)
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I juts need to delte some lines from a file.
here comes theactual scenario
I have some data in file like say
srinivasa prabhu kumar antony
srinivas king prabhu antony
srinivas prabhu king yar venkata
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Discussion started by: cmccabe
5 Replies
LEARN ABOUT DEBIAN
path::dispatcher::match
Path::Dispatcher::Match(3pm) User Contributed Perl Documentation Path::Dispatcher::Match(3pm)NAME
Path::Dispatcher::Match - the result of a successful rule match
SYNOPSIS
my $rule = Path::Dispatcher::Rule::Tokens->new(
tokens => [ 'attack', qr/^w+$/ ],
block => sub {
my $match = shift;
attack($match->pos(2))
},
);
my $match = $rule->match("attack dragon");
# introspection
$match->path # "attack dragon"
$match->leftover # empty string (populated with prefix rules)
$match->rule # $rule
$match->positional_captures # ["attack", "dragon"] (decided by the rule)
$match->pos(1) # "attack"
$match->pos(2) # "dragon"
$match->run # attack("dragon")
DESCRIPTION
If a Path::Dispatcher::Rule successfully matches a path, it creates one or more "Path::Dispatcher::Match" objects.
ATTRIBUTES
rule
The Path::Dispatcher::Rule that created this match.
path
The path that the rule matched.
leftover
The rest of the path. This is populated when the rule matches a prefix of the path.
positional_captures
Any positional captures generated by the rule. For example, Path::Dispatcher::Rule::Regex populates this with the capture variables.
named_captures
Any named captures generated by the rule. For example, Path::Dispatcher::Rule::Regex populates this with named captures.
parent
The parent match object, if applicable (which may be set if this match is the child of, for exampl, a Path::Dispatcher::Rule::Under prefix)
METHODS
run
Executes the rule's codeblock with the same arguments.
pos($i)
Returns the $ith positional capture, 1-indexed.
perl v5.12.4 2011-08-30 Path::Dispatcher::Match(3pm)
09-11-2017
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