I think the below will capture lines 2-6, but not line 1 (looks like 018328) is being captured by the regex. Is the syntax correct or is there a better way? Thank you .
perl
Code:
if ($FuncrefGene !~ /exonic/i && $GeneDetailrefGene=~/\D(\d+)/) { # capture the digits into $1
if ($1 > 11) { #
$1 ||= 0; # Give it a value of zero if no numeric value was found.
$classification = 'Likely Benign'; # Reclassify intronic variants (with distance only) based on distance to exon > 10 to Likely Benign
}
}
else {
if ($FuncrefGene !~ /exonic/i && $GeneDetailrefGene=~/(\D\d+)/) { # capture the digits after any non-digit into $1
if ($1 > 11) { #
$1 ||= 0; # Give it a value of zero if no numeric value was found.
$classification = 'Likely Benign'; # Reclassify intronic variants (with distance only) based on distance to exon > 10 to Likely Benign
}
}
else {
if ($FuncrefGene !~ /exonic/i) {
my ($transcript) = ($GeneDetailrefGene) =~ /(?:\.\d+[+*-])/; # Get a numeric value if exists using (.) and (+/-) and capture digits into $transcript.
$transcript ||= 0; # Give it a value of zero if no numeric value was found.
$classification = 'Likely Benign' if $transcript > 11; # Reclassify intronic variants (following c. nomenclature) to Likely Benign if distance greater than 10
}
}
i am using perl in win2000advanced server...
---------------------------
perl -version:
---------------------------
This is perl, v5.6.1 built for MSWin32-x86-multi-thread
(with 1 registered patch, see perl -V for more detail)
Copyright 1987-2001, Larry Wall
Binary build 638 provided by... (1 Reply)
Hi All
I have a Small Requiement
I wanted to replace all the Follwing lines as follows
Input:: file1
EVALUATE WS-TEMP-ATTR(15:1)
WHEN 'D'
MOVE DFHDARK TO WS-ATTR-COLOR
WHEN OTHER
MOVE DFHDFT ... (9 Replies)
Using Solaris 9 and 10.
What we want to do is set up global rules for our password files to restrict all users, not only new ones set up with the rules but also the ones that have been sitting on the system for years.
Is there a global way to force all users to change their password every 90... (1 Reply)
dears
i am using solaris 10
i am facing a problem when i make setup for solaris i choose the country egypt and i select the language north america
but i forget to do that the i found the date Jun written in arabic
i want to change character set to written in english
-rw-r--r-- 1 root ... (4 Replies)
Hi,
How to check if a string on file2 exactly matches with a part or complete string on file1, and return a match indicator based on some match rules.
1) only records on file1 with category A should be matched. for other category, the output match indicator should default to 'N'
2) on file2... (13 Replies)
Hy there!
Some time ago I encrypted the harddrive of my notebook.
Now, I can't remember it correctly.
I want to create a list with all possible combinations of the words I used (I still remember all the words....).
The password was created like this:
... (1 Reply)
Hi My requirement is very simple .
I juts need to delte some lines from a file.
here comes theactual scenario
I have some data in file like say
srinivasa prabhu kumar antony
srinivas king prabhu antony
srinivas prabhu king yar venkata
venkata kingson srinivas... (6 Replies)
please help solving the following. I have access to redhat linux cluster having 32gigs of ram.
I have duplicate ids for variable names, in the file 1,2 are duplicates;3,4 and 5 are duplicates;6 and 7 are duplicates. My objective is to use only the first occurrence of these duplicates.
Lookup... (4 Replies)
In the perl below, which does execute, I am having trouble with the else in Rule 3. The digit in f{8} is extracted and used to update f accordinly along with the value in f.
There can be either - * or + before the number that is extracted but the same logic applies, that is if the value is greater... (5 Replies)
Discussion started by: cmccabe
5 Replies
LEARN ABOUT SUSE
mail::spamassassin::plugin::shortcircuit
Mail::SpamAssassin::Plugin::Shortcircuit(3) User Contributed Perl Documentation Mail::SpamAssassin::Plugin::Shortcircuit(3)NAME
Mail::SpamAssassin::Plugin::Shortcircuit - short-circuit evaluation for certain rules
SYNOPSIS
loadplugin Mail::SpamAssassin::Plugin::Shortcircuit
report Content analysis details: (_SCORE_ points, _REQD_ required, s/c _SCTYPE_)
add_header all Status "_YESNO_, score=_SCORE_ required=_REQD_ tests=_TESTS_ shortcircuit=_SCTYPE_ autolearn=_AUTOLEARN_ version=_VERSION_"
DESCRIPTION
This plugin implements simple, test-based shortcircuiting. Shortcircuiting a test will force all other pending rules to be skipped, if
that test is hit. In addition, a symbolic rule, "SHORTCIRCUIT", will fire.
Recomended usage is to use "priority" to set rules with strong S/O values (ie. 1.0) to be run first, and make instant spam or ham
classification based on that.
CONFIGURATION SETTINGS
The following configuration settings are used to control shortcircuiting:
shortcircuit SYMBOLIC_TEST_NAME {ham|spam|on|off}
Shortcircuiting a test will force all other pending rules to be skipped, if that test is hit.
Recomended usage is to use "priority" to set rules with strong S/O values (ie. 1.0) to be run first, and make instant spam or ham
classification based on that.
To override a test that uses shortcircuiting, you can set the classification type to "off".
on Shortcircuits the rest of the tests, but does not make a strict classification of spam or ham. Rather, it uses the default score
for the rule being shortcircuited. This would allow you, for example, to define a rule such as
body TEST /test/
describe TEST test rule that scores barely over spam threshold
score TEST 5.5
priority TEST -100
shortcircuit TEST on
The result of a message hitting the above rule would be a final score of 5.5, as opposed to 100 (default) if it were classified as
spam.
off Disables shortcircuiting on said rule.
spam
Shortcircuit the rule using a set of defaults; override the default score of this rule with the score from
"shortcircuit_spam_score", set the "noautolearn" tflag, and set priority to "-100". In other words, equivalent to:
shortcircuit TEST on
priority TEST -100
score TEST 100
tflags TEST noautolearn
ham Shortcircuit the rule using a set of defaults; override the default score of this rule with the score from
"shortcircuit_ham_score", set the "noautolearn" and "nice" tflags, and set priority to "-100". In other words, equivalent to:
shortcircuit TEST on
priority TEST -100
score TEST -100
tflags TEST noautolearn nice
shortcircuit_spam_score n.nn (default: 100)
When shortcircuit is used on a rule, and the shortcircuit classification type is set to "spam", this value should be applied in place
of the default score for that rule.
shortcircuit_ham_score n.nn (default: -100)
When shortcircuit is used on a rule, and the shortcircuit classification type is set to "ham", this value should be applied in place of
the default score for that rule.
TAGS
The following tags are added to the set available for use in reports, headers etc.:
_SC_ shortcircuit status (classification and rule name)
_SCRULE_ rulename that caused the shortcircuit
_SCTYPE_ shortcircuit classification ("spam", "ham", "default", "none")
SEE ALSO
"http://issues.apache.org/SpamAssassin/show_bug.cgi?id=3109"
perl v5.12.1 2010-03-16 Mail::SpamAssassin::Plugin::Shortcircuit(3)