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Top Forums UNIX for Beginners Questions & Answers Finding common entries between 10 columns Post 303002517 by Sanchari on Saturday 26th of August 2017 06:26:55 AM
Old 08-26-2017
Finding common entries between 10 columns

Hello, I need to find the intersection across 10 columns. Kindly help.

my file (INPUT.csv) looks like this
Code:
 4_R         4_S         8_R         8_S         12_R         12_S         24_R         24_S  
LOC_Os01g01010 LOC_Os01g01010 LOC_Os01g01010 LOC_Os04g48290 LOC_Os01g01010 LOC_Os01g01010 LOC_Os01g01010 LOC_Os04g48290
LOC_Os01g01019 LOC_Os01g01019 LOC_Os01g01019 LOC_Os05g39580 LOC_Os01g01019 LOC_Os01g01019 ChrSy.fgenesh.gene.29 LOC_Os05g39580
LOC_Os01g01019 LOC_Os01g01019 LOC_Os01g01019 LOC_Os05g39580 LOC_Os01g01019 LOC_Os01g01019 ChrSy.fgenesh.gene.29 LOC_Os05g39580
                                                                                   LOC_Os01g01010                                                                                            ChrSy.fgenesh.gene.29
                                                                                                                                                                                                          LOC_Os01g01010

There can be duplicate entries and the no. of entries in each column can be different.

Last edited by Scrutinizer; 08-26-2017 at 09:12 AM.. Reason: Added closing code tag
 

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TABS(1) 						    BSD General Commands Manual 						   TABS(1)

NAME
tabs -- set terminal tabs SYNOPSIS
tabs [-n | -a | -a2 | -c | -c2 | -c3 | -f | -p | -s | -u] [+m[n]] [-T type] tabs [-T type] [+[n]] n1[,n2,...] DESCRIPTION
The tabs utility displays a series of characters that clear the hardware terminal tab settings then initialises tab stops at specified posi- tions, and optionally adjusts the margin. In the first synopsis form, the tab stops set depend on the command line options used, and may be one of the predefined formats or at regular intervals. In the second synopsis form, tab stops are set at positions n1, n2, etc. If a position is preceded by a '+', it is relative to the previous position set. No more than 20 positions may be specified. If no tab stops are specified, the ``standard'' UNIX tab width of 8 is used. The options are as follows: -n Set a tab stop every n columns. If n is 0, the tab stops are cleared but no new ones are set. -a Assembler format (columns 1, 10, 16, 36, 72). -a2 Assembler format (columns 1, 10, 16, 40, 72). -c COBOL normal format (columns 1, 8, 12, 16, 20, 55) -c2 COBOL compact format (columns 1, 6, 10, 14, 49) -c3 COBOL compact format (columns 1, 6, 10, 14, 18, 22, 26, 30, 34, 38, 42, 46, 50, 54, 58, 62, 67). -f FORTRAN format (columns 1, 7, 11, 15, 19, 23). -p PL/1 format (columns 1, 5, 9, 13, 17, 21, 25, 29, 33, 37, 41, 45, 49, 53, 57, 61). -s SNOBOL format (columns 1, 10, 55). -u Assembler format (columns 1, 12, 20, 44). +m[n], +[n] Set an n character left margin, or 10 if n is omitted. -T type Output escape sequence for the terminal type type. ENVIRONMENT
The LANG, LC_ALL, LC_CTYPE and TERM environment variables affect the execution of tabs as described in environ(7). The -T option overrides the setting of the TERM environment variable. If neither TERM nor the -T option are present, tabs will fail. EXIT STATUS
The tabs utility exits 0 on success, and >0 if an error occurs. SEE ALSO
expand(1), stty(1), tput(1), unexpand(1), termcap(5) STANDARDS
The tabs utility conforms to IEEE Std 1003.1-2001 (``POSIX.1''). HISTORY
A tabs utility appeared in PWB UNIX. This implementation was introduced in FreeBSD 5.0. BUGS
The current termcap(5) database does not define the 'ML' (set left soft margin) capability for any terminals. BSD
May 20, 2002 BSD
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