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Top Forums Shell Programming and Scripting Mapping the values of ids of two columns of file1 from file2 Post 303000903 by Scrutinizer on Saturday 22nd of July 2017 04:06:50 PM
Old 07-22-2017
Try:
Code:
awk 'NR==FNR{A[$1]=$2; next} {print A[$1], $0, A[$NF]}' file2 file1

Output:
Code:
171200 PT|np_496075.1 st|K92748.1 st|K89648.1 PT|np_001300561.1 171202
171648 PT|np_497284.1 st|K90752.1 st|K90279.1 PT|np_740775.1 171647
171647 PT|np_497749.1 st|K90752.1 st|K92038.1 PT|np_490856.1 171608
171648 PT|np_497284.1 st|K90752.1 st|K88095.1 PT|np_494764.1 171646

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DIFF(1) 						      General Commands Manual							   DIFF(1)

NAME
diff - print differences between two files SYNOPSIS
diff [-c | -e | -C n] [-br]file1 file2 OPTIONS
-C n Produce output that contains n lines of context -b Ignore white space when comparing -c Produce output that contains three lines of context -e Produce an ed-script to convert file1 into file2 -r Apply diff recursively to files and directories of EXAMPLES
diff file1 file2 # Print differences between 2 files diff -C 0 file1 file2 # Same as above diff -C 3 file1 file2 # Output three lines of context with every diff -c file1 file2 # Same diff /etc /dev # Compares recursively the directories /etc and /dev diff passwd /etc # Compares ./passwd to /etc/passwd DESCRIPTION
the same name, when file1 and file2 are both directories" difference encountered" Diff compares two files and generates a list of lines telling how the two files differ. Lines may not be longer than 128 characters. If the two arguments on the command line are both directories, diff recursively steps through all subdirectories comparing files of the same name. If a file name is found only in one directory, a diagnostic message is written to stdout. A file that is of either block special, character special or FIFO special type, cannot be compared to any other file. On the other hand, if there is one directory and one file given on the command line, diff tries to compare the file with the same name as file in the directory directory. SEE ALSO
cdiff(1), cmp(1), comm(1), patch(1). DIFF(1)
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