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Top Forums UNIX for Beginners Questions & Answers Match Strings between two files, print portions of each file together when matched ([g]awk) Post 302999784 by jvoot on Tuesday 27th of June 2017 07:55:56 PM
Old 06-27-2017
Thanks so much for this R. Singh. Unfortunately, it didn't seem to do the trick. For example, line 4 of 'Desired Output' should be:

Code:
4 6 >CR                  6 D      6 -1 -1 -1 -1 -1 -1 -1 -1 -1

But in the code you offered, it is:
Code:
6 >CR                  6 D   -1 -1 -1 -1 -1 -1 -1 -1 -1

As I look through $5 of the output of your code, which is supposed to constitute $2 of file1.txt, I see values there that do not exist in the entirety $2 for the entire file (i.e., $5 of output has a value that is not contained in $2 of file1.txt at all).

Thanks so much for the attempt though!
 

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COMBINE(1)																COMBINE(1)

NAME
combine - combine sets of lines from two files using boolean operations SYNOPSIS
combine file1 and file2 combine file1 not file2 combine file1 or file2 combine file1 xor file2 _ file1 and file2 _ _ file1 not file2 _ _ file1 or file2 _ _ file1 xor file2 _ DESCRIPTION
combine combines the lines in two files. Depending on the boolean operation specified, the contents will be combined in different ways: and Outputs lines that are in file1 if they are also present in file2. not Outputs lines that are in file1 but not in file2. or Outputs lines that are in file1 or file2. xor Outputs lines that are in either file1 or file2, but not in both files. "-" can be specified for either file to read stdin for that file. The input files need not be sorted, and the lines are output in the order they occur in file1 (followed by the order they occur in file2 for the two "or" operations). Bear in mind that this means that the operations are not commutative; "a and b" will not necessarily be the same as "b and a". To obtain commutative behavior sort and uniq the result. Note that this program can be installed as "_" to allow for the syntactic sugar shown in the latter half of the synopsis (similar to the test/[ command). It is not currently installed as "_" by default, but you can alias it to that if you like. SEE ALSO
join(1) AUTHOR
Copyright 2006 by Joey Hess <joey@kitenet.net> Licensed under the GNU GPL. moreutils 2012-04-09 COMBINE(1)
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