04-08-2017
Column 11 of file2 was duplicated in the output, but this works for me. Thank you so much!
10 More Discussions You Might Find Interesting
1. Programming
Hi friends,,
i have find the matching data between 2files.
My file1 have a data like
rs3001336
rs3984736
rs2840532
File2 have a data like
rs3736330 1 2359237 A G 0.28 1.099 0.010
rs2840532 1 2359977 G A 0.363 0.3373 1.123
rs3001336 1 2365193 G A 0.0812 0.07319 1.12 ... (1 Reply)
Discussion started by: sureshraj
1 Replies
2. Shell Programming and Scripting
Hi friends,,
i have find the matching data between 2files.
My file1 have a data like
rs3001336
rs3984736
rs2840532
File2 have a data like
rs3736330 1 2359237 A G 0.28 1.099 0.010
rs2840532 1 2359977 G A 0.363 0.3373 1.123
rs3001336 1 ... (4 Replies)
Discussion started by: sureshraj
4 Replies
3. Shell Programming and Scripting
I have about 20 CSV's that all look like this:
"","","","","","","","","","","","","","","",""What I've been told I need to produce is the exact same thing, but with each file now containing the start_code from every other file where the email matches.
It doesn't matter if any of the other... (1 Reply)
Discussion started by: Demosthenes
1 Replies
4. Shell Programming and Scripting
Okay so I'm pretty new to scripting therefore this problem seems pretty tough. I have a main file that has a column of IP addresses and I have to compare it with 3 separate files that also have IP address columns.
These 3 files are automatically generated from 3 different servers.
Each time... (2 Replies)
Discussion started by: Spunkerspawn
2 Replies
5. Shell Programming and Scripting
Hi,
Can anyone help me to compare two files and get the matching data... say i have file1 and file2 ... file1 has 300 unique data with that i need to match with file2 to see how may are matching.. file2 have 1000 records. (4 Replies)
Discussion started by: zooby
4 Replies
6. Shell Programming and Scripting
Hello Experts,
I have come back to this forum after a while now, since require a better way to get my result.. My query is as below..
I have 3 files -- 1 Input file, 2 Data files .. Based on the input file, data has to be retreived matching from two files which has one common key..
For EX:... (4 Replies)
Discussion started by: shaliniyadav
4 Replies
7. Shell Programming and Scripting
Dear List,
I have a file of csv data which has a different line per compliance check per host. I do not want any omissions from this csv data file which looks like this:
date,hostname,status,color,check
02-03-2012,COMP1,FAIL,Yellow,auth_pass_change... (3 Replies)
Discussion started by: landossa
3 Replies
8. Shell Programming and Scripting
Hello,
I have a file with such structure:
>ENSGALG00000000011|ENSGALT00000000012|57|1123|1125
AACTGTGTGTTTTTT
>ENSGALG00000000012|ENSGALT00000000013|57|1145|1155
AAAAAAGGTCCTGTGTGC
>ENSGALG00000000015|ENSGALT00000000014|57|1144|1155
AAAATGTGTGTGTGTGTGTGTG
I want to use another file... (8 Replies)
Discussion started by: Homa
8 Replies
9. Shell Programming and Scripting
In the awk below I am trying to set/update the value of $14 in file2 in
bold, using the matching NM_ in $12 or $9 in file2
with the NM_ in $2 of file1.
The lengths of $9 and $12 can be variable but what is consistent is the start pattern
will always be NM_ and the end pattern is always ;... (2 Replies)
Discussion started by: cmccabe
2 Replies
10. UNIX for Beginners Questions & Answers
I apologize in advance, but I continue to have trouble searching for matches between two files and then printing portions of each to output in awk and would very much appreciate some help.
I have data as follows:
File1
PS012,002 PRQ 0 1 1 17 1 0 -1 3 2 1 2 -1 ... (7 Replies)
Discussion started by: jvoot
7 Replies
JOIN(1) General Commands Manual JOIN(1)
NAME
join - relational database operator
SYNOPSIS
join [ options ] file1 file2
DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If file1 is `-', the standard
input is used.
File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in
each line.
There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con-
sists of the common field, then the rest of the line from file1, then the rest of the line from file2.
Fields are normally separated by blank, tab or newline. In this case, multiple separators count as one, and leading separators are dis-
carded.
These options are recognized:
-an In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2.
-e s Replace empty output fields by string s.
-jn m Join on the mth field of file n. If n is missing, use the mth field in each file.
-o list
Each output line comprises the fields specifed in list, each element of which has the form n.m, where n is a file number and m is a
field number.
-tc Use character c as a separator (tab character). Every appearance of c in a line is significant.
SEE ALSO
sort(1), comm(1), awk(1)
BUGS
With default field separation, the collating sequence is that of sort -b; with -t, the sequence is that of a plain sort.
The conventions of join, sort, comm, uniq, look and awk(1) are wildly incongruous.
JOIN(1)