You didn't supply sample input and desired output, so I couldn't attempt a relevant demonstration.
Possible utilities:
On a system:
Some details for xml2 package:
Versions appear to be available via brew, fink, port for a system like:
Best wishes ... cheers, drl
Apologies if this has already been covered in this site somewhere, I did try looking but without any success. I am new to the whole XML thing, very late starter, and have a requirement to convert an XML fiule to a CSV fomat. I am crrently working on a Solaris OS. Does anyone have any suggestions,... (2 Replies)
Iam pretty new to UNIX and would like to convert a CSV to an XML file using AWK scripts. Can anybody suggest a solution? My CSV file looks something like this :
Serial No Growth% Annual % Commission % Unemployed %
1 35% 29% 59% 42%
2 61% ... (15 Replies)
Hi,
i am really fresh with shell scripting and programming,
i have an issue i am not able to solve to populate data on my server for Cisco IP phones.
I have CSV file within the following format:
;;;;;;;;;;;;;;;;;;
;;;;;;;;;;;;;;;;;;
;;;;;;;;;;;;;;;;;;
;;;;;;;;;;;;;;;;;;
;;;;;;;;;;;;;;;;;;... (9 Replies)
Hi,
I want to write a perl script. Which should accept the xml file, one xsl file and the loaction. The perl script should process the xml file using the xsl file and puts the out put in specified location.
For example:
My.perl is perls cript.
my.xml
is like this
<?xml version="1.0"... (2 Replies)
Hi ,
Please any one to help on ,extract this xml code into csv columns list.
<SOURCEFIELD BUSINESSNAME ="" DATATYPE ="date" DESCRIPTION ="" FIELDNUMBER ="1"
FIELDPROPERTY ="0" FIELDTYPE ="ELEMITEM" HIDDEN ="NO" KEYTYPE ="NOT A KEY" LENGTH ="19"
LEVEL ="0" NAME ="BUSINESS_DATE"... (4 Replies)
I need to convert below xml code to csv. I searched other posts as well but this post (_https://www.unix.com/shell-programming-scripting/174417-extract-parse-xml-data-statistic-value-csv.html) gives "sed command garbled" error. As of now I have written a long script to do it, but can it be done with... (7 Replies)
I am in need of converting billions of XML into csv file to load data to DB, i have found the below code in perl but not sure why it's not working properly.
CODE:
#!/usr/bin/perl
# Script to illustrate how to parse a simple XML file
# and pick out all the values for a specific element, in... (1 Reply)
Hello,
I have copied .xml code for a single item below. I am trying to extract three items (field indices*b244 (second occurrence), b203, and j151), so the desired output would be:
9780323013543 Manual of Natural Veterinary Medicine: Science and Tradition, 1e 68.95
A parallel solution,... (14 Replies)
Hello,
For i while i have been using XMLStarlet to convert several XML files to CSV files. So far this always went fine.
Today however i got a new XML format however but i cannot find out how to get the data i need.
Below is part of the code where it shows the different format. What... (10 Replies)
Discussion started by: SDohmen
10 Replies
LEARN ABOUT DEBIAN
bp_bioflat_index
BP_BIOFLAT_INDEX(1p) User Contributed Perl Documentation BP_BIOFLAT_INDEX(1p)NAME
bioflat_index.pl - index sequence files using Bio::DB::Flat
DESCRIPTION
Create or update a biological sequence database indexed with the
Bio::DB::Flat indexing scheme. The arguments are a list of flat files
containing the sequence information to be indexed.
USAGE
bioflat_index.pl <options> file1 file2 file3...
Options:
--create Create or reinitialize the index. If not specified,
the index must already exist.
--format <format> The format of the sequence files. Must be one
of "genbank", "swissprot", "embl" or "fasta".
--location <path> Path to the directory in which the index files
are stored.
--dbname <name> The symbolic name of the database to be created.
--indextype <type> Type of index to create. Either "bdb" or "flat".
"binarysearch" is the same as "flat".
Options can be abbreviated. For example, use -i for --indextype.
The following environment variables will be used as defaults if the corresponding options are not provided:
OBDA_FORMAT format of sequence file
OBDA_LOCATION path to directory in which index files are stored
OBDA_DBNAME name of database
OBDA_INDEX type of index to create
perl v5.14.2 2012-03-02 BP_BIOFLAT_INDEX(1p)