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Full Discussion: Transpose large data in UNIX
Top Forums UNIX for Beginners Questions & Answers Transpose large data in UNIX Post 302990565 by marwah on Saturday 28th of January 2017 02:24:29 PM
Old 01-28-2017
Transpose large data in UNIX
Hi

I have the following sample of data: my full data dimention is 900,000* 1119

Code:
rs987435        C       G       1       1       1       0       2
rs345783        C       G       0       0       1       0       0
rs955894        G       T       1       1       2       2       1
rs6088791       A       G       1       2       0       0       1
rs11180435      C       T       1       0       1       1       1
rs17571465      A       T       1       2       2       2       2
rs17011450      C       T       2       2       2       2       2
rs6919430       A       C       2       1       2       2       2
rs2342723       C       T       0       2       0       0       0
rs11992567      C       T       2       2       2       2       2

I would like to transpose this data so that the data looks like the following
Code:
rs345783    rs955894    
C                  G
G                  T 
1                   0
1                   0
1                   1
0                   0
2                  0

and so one

I appreciate your help
Last edited by marwah; 01-28-2017 at 04:27 PM..
 

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LEARN ABOUT CENTOS

locale::codes::langvar

Locale::Codes::LangVar(3)				User Contributed Perl Documentation				 Locale::Codes::LangVar(3)

NAME

       Locale::Codes::LangVar - standard codes for language variation identification

SYNOPSIS

	  use Locale::Codes::LangVar;

	  $lvar = code2langvar('acm');		       # $lvar gets 'Mesopotamian Arabic'
	  $code = langvar2code('Mesopotamian Arabic'); # $code gets 'acm'

	  @codes   = all_langvar_codes();
	  @names   = all_langvar_names();

DESCRIPTION

       The "Locale::Codes::LangVar" module provides access to standard codes used for identifying language variations, such as those as defined in
       the IANA language registry.

       Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language
       registry codes will be used.

SUPPORTED CODE SETS

       There are several different code sets you can use for identifying language variations. A code set may be specified using either a name, or
       a constant that is automatically exported by this module.

       For example, the two are equivalent:

	  $lvar = code2langvar('arevela','alpha');
	  $lvar = code2langvar('arevela',LOCALE_LANGVAR_ALPHA);

       The codesets currently supported are:

       alpha
	   This is the set of alphanumeric codes from the IANA language registry, such as 'arevela' for Eastern Armenian.

	   This code set is identified with the symbol "LOCALE_LANGVAR_ALPHA".

	   This is the default code set.

ROUTINES

       code2langvar ( CODE [,CODESET] )
       langvar2code ( NAME [,CODESET] )
       langvar_code2code ( CODE ,CODESET ,CODESET2 )
       all_langvar_codes ( [CODESET] )
       all_langvar_names ( [CODESET] )
       Locale::Codes::LangVar::rename_langvar  ( CODE ,NEW_NAME [,CODESET] )
       Locale::Codes::LangVar::add_langvar  ( CODE ,NAME [,CODESET] )
       Locale::Codes::LangVar::delete_langvar  ( CODE [,CODESET] )
       Locale::Codes::LangVar::add_langvar_alias  ( NAME ,NEW_NAME )
       Locale::Codes::LangVar::delete_langvar_alias  ( NAME )
       Locale::Codes::LangVar::rename_langvar_code  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangVar::add_langvar_code_alias  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangVar::delete_langvar_code_alias  ( CODE [,CODESET] )
	   These routines are all documented in the Locale::Codes::API man page.

SEE ALSO

       Locale::Codes
	   The Locale-Codes distribution.

       Locale::Codes::API
	   The list of functions supported by this module.

       http://www.iana.org/assignments/language-subtag-registry
	   The IANA language subtag registry.

AUTHOR

       See Locale::Codes for full author history.

       Currently maintained by Sullivan Beck (sbeck@cpan.org).

COPYRIGHT

	  Copyright (c) 2011-2013 Sullivan Beck

       This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

perl v5.16.3							    2013-04-12						 Locale::Codes::LangVar(3)
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