I have a comma delimited file that sometimes has addresses details in. The problem is that the address detail can be seen as:
"Sample House, Sample Road". When I run a script specifying the file is comma delimited I would like it to ignore comma's that are in between speech marks.
Is this... (2 Replies)
Hi All,
I have output of sql saved in comma separated file.
Now i need to read line by line this file
and assign word to a unix variable for further processing
Eg:
Test file
world, 1, 3, 4
earth,2,3,4,5
moon,1,2,3,4
Output should be
word1= world
word2=1
echo " first word... (7 Replies)
Query:
There are two files as below –
/home/rgupta/input/file.txt.arch (source file)
/home/rgupta/output/file.txt (destination file)
Files details are attached for the reference.
Scenario:
File /home/rgupta/input/file.txt.arch picked up by an application xyz. Application xyz does... (1 Reply)
I have a flat file whose contents are comma delimited and there are 84 columns in total, so everytime I try to view the contents, things get over lapped it becomes diffcult to read through the result set.
Is there a command / what would be the best way...if I want to view the results alligned... (4 Replies)
Question about how to change the first & last name in column one & two so that the names have a capital letter for just the first letter. Example:
asdf@asdf.com,asdf,asdfasdf,176.23.22.345,4/12/2012
changed to:
asdf@asdf.com,Asdf,Asdfasdf,176.23.22.345,4/12/2012
Thank you kindly,
Nick (2 Replies)
Hi All,
I need a unix script to convert .csv files to .skv files (changing a comma delimited file to a semi colon delimited file). I am a unix newbie and so don't know where to start. The script will be scheduled using cron and needs to convert each .csv file in a particular folder to a .skv... (4 Replies)
Hello,
I have a bilingual database with the following structure
a,b,c=d,e,f
The right half is in a Left to right script and the second is in a Right to left script as the examples below show
What I need is to separate out the database such that the first word on the left hand matches the first... (4 Replies)
Hi,
I am wanting to create a script that will construct a SQL statement based on a a space delimited string that it read from a config file.
Example of the SQL will be
For example, it will read a string like "AAA BBB CCC" and assign to a variable named IN_STRING.
I then concatenate... (2 Replies)
I have a large database with the following structure:
Indicword,Indicword,Indicword=English
on a line.
Not all lines will have this structure. Some might have a single word mapping to a single word in Indic.
An example will make this clear
... (4 Replies)
Discussion started by: gimley
4 Replies
LEARN ABOUT DEBIAN
vcf-isec
VCF-ISEC(1) User Commands VCF-ISEC(1)NAME
vcf-isec - create intersections, unions, complements on bgzipped and tabix indexed VCF or tab-delimited files
SYNOPSIS
vcf-isec [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Create intersections, unions, complements on bgzipped and tabix indexed VCF or tab-delimited files.
Note that lines from all files can be intermixed together on the output, which can yield unexpected results.
OPTIONS -C, --chromosomes <list|file>
Process the given chromosomes (comma-separated list or one chromosome per line in a file).
-c, --complement
Output positions present in the first file but missing from the other files.
-d, --debug
Debugging information
-f, --force
Continue even if the script complains about differing columns.
-o, --one-file-only
Print only entries from the left-most file. Without -o, all unique positions will be printed.
-n, --nfiles [+-=]<int>
Output positions present in this many (=), this many or more (+), or this many or fewer (-) files.
-p, --prefix <path>
If present, multiple files will be created with all possible isec combinations. (Suitable for Venn Diagram analysis.)
-t, --tab <chr:pos:file>
Tab-delimited file with indexes of chromosome and position columns. (1-based indexes)
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
EXAMPLES
bgzip file.vcf; tabix -p vcf file.vcf.gz bgzip file.tab; tabix -s 1 -b 2 -e 2 file.tab.gz
vcf-isec 0.1.5 July 2011 VCF-ISEC(1)
01-26-2017
